FFCP PHASE1:Hg19::chr8:50822344..50822366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54212 | |EntrezGene=54212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13740 | |HGNC=13740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518864,ENST00000521574,uc010lxy.1_5end | |association_with_transcript=0bp_to_ENST00000518864,ENST00000521574,uc010lxy.1_5end | ||
|cluster_id=chr8:50822344..50822366,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_SNTG1_5end | |description=CAGE_peak_10_at_SNTG1_5end | ||
|id=chr8:50822344..50822366,+ | |id=chr8:50822344..50822366,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10!UBERON:0006215;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;3.31e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.25e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-51!57;UBERON:0005068!1.24e-51!57;UBERON:0006241!1.24e-51!57;UBERON:0007135!1.24e-51!57;UBERON:0002020!4.88e-49!34;UBERON:0003528!4.88e-49!34;UBERON:0001893!1.53e-48!34;UBERON:0002791!8.94e-47!33;UBERON:0002780!1.72e-45!41;UBERON:0001890!1.72e-45!41;UBERON:0006240!1.72e-45!41;UBERON:0001869!6.61e-45!32;UBERON:0003080!3.19e-44!42;UBERON:0000073!4.13e-44!94;UBERON:0001016!4.13e-44!94;UBERON:0002616!8.12e-44!59;UBERON:0001017!3.48e-43!82;UBERON:0005743!1.17e-40!86;UBERON:0002346!3.46e-39!90;UBERON:0000955!1.15e-37!69;UBERON:0006238!1.15e-37!69;UBERON:0002619!5.82e-35!22;UBERON:0003075!1.16e-34!86;UBERON:0007284!1.16e-34!86;UBERON:0000956!1.03e-33!25;UBERON:0000203!1.03e-33!25;UBERON:0001950!1.24e-30!20;UBERON:0003056!6.01e-30!61;UBERON:0000924!6.48e-26!173;UBERON:0006601!6.48e-26!173;UBERON:0007023!7.65e-25!115;UBERON:0004121!1.03e-22!169;UBERON:0000033!1.60e-20!123;UBERON:0000153!3.08e-20!129;UBERON:0007811!3.08e-20!129;UBERON:0002420!3.56e-17!9;UBERON:0007245!3.56e-17!9;UBERON:0010009!3.56e-17!9;UBERON:0010011!3.56e-17!9;UBERON:0000454!3.56e-17!9;UBERON:0002308!9.57e-17!9;UBERON:0000125!9.57e-17!9;UBERON:0001871!7.44e-15!7;UBERON:0000200!1.08e-14!6;UBERON:0000349!8.28e-13!5;UBERON:0009663!9.12e-13!7;UBERON:0000025!5.84e-12!194;UBERON:0000369!7.49e-11!4;UBERON:0002435!7.49e-11!4;UBERON:0000204!7.49e-11!4;UBERON:0010082!7.49e-11!4;UBERON:0003076!4.60e-09!15;UBERON:0003057!4.60e-09!15;UBERON:0005383!1.13e-08!3;UBERON:0005382!1.13e-08!3;UBERON:0002771!1.82e-08!3;UBERON:0002021!3.49e-08!5;UBERON:0004111!1.25e-07!241;UBERON:0006331!1.50e-07!3;UBERON:0000477!2.72e-07!286;UBERON:0000475!2.84e-07!365;UBERON:0000064!2.90e-07!219;UBERON:0000483!4.93e-07!309;UBERON:0002298!6.70e-07!8;UBERON:0000119!7.36e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.49e-19;4!UBERON:0000923;4.49e-19;4!UBERON:0010316;4.49e-19;4!UBERON:0005291;4.49e-19;4!UBERON:0002050;1.81e-15;5!UBERON:0005423;1.81e-15;5!UBERON:0002702;2.60e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0001950;2.54e-08;20!UBERON:0003135;1.20e-07;11!UBERON:0002619;1.20e-07;22!UBERON:0001870;2.71e-07;3!UBERON:0000956;7.95e-07;25!UBERON:0000203;7.95e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,1.89e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0001950,2.51e-08,20;UBERON:0002619,1.19e-07,22;UBERON:0003135,1.20e-07,11;UBERON:0001870,2.19e-07,3;UBERON:0002346,2.57e-07,86;UBERON:0000956,7.88e-07,25;UBERON:0000203,7.88e-07,25 | |||
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| ||
|short_description=p10@SNTG1 | |short_description=p10@SNTG1 | ||
}} | }} |
Latest revision as of 10:42, 18 September 2015
Short description: | p10@SNTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SNTG1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000518864, ENST00000521574, uc010lxy.1_5end |
EntrezGene: | SNTG1 |
HGNC: | 13740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 1.89e-10 | 2 |
testis | 3.52e-10 | 8 |
neocortex | 2.51e-08 | 20 |
regional part of cerebral cortex | 1.19e-07 | 22 |
male reproductive organ | 1.20e-07 | 11 |
frontal cortex | 2.19e-07 | 3 |
neurectoderm | 2.57e-07 | 86 |
cerebral cortex | 7.88e-07 | 25 |
pallium | 7.88e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.25e-08 | 10 |