FFCP PHASE1:Hg19::chr2:217277169..217277266,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50485 | |EntrezGene=50485 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11102 | |HGNC=11102 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8F8 | |UniProt=C9J8F8 | ||
|association_with_transcript=0bp_to_ENST00000444508_5end | |association_with_transcript=0bp_to_ENST00000444508_5end | ||
|cluster_id=chr2:217277169..217277266,+ | |||
|description=CAGE_peak_1_at_SMARCAL1_5end | |description=CAGE_peak_1_at_SMARCAL1_5end | ||
|id=chr2:217277169..217277266,+ | |id=chr2:217277169..217277266,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.03e-07!53;CL:0000051!1.03e-07!53;CL:0000838!2.49e-07!52 | |ontology_enrichment_celltype=CL:0000542!1.03e-07!53;CL:0000051!1.03e-07!53;CL:0000838!2.49e-07!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.03e-07,53;CL:0000051,1.03e-07,53;CL:0000838,2.49e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.12e-07;32!UBERON:0002193;6.73e-07;42 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SMARCAL1 | |short_description=p1@SMARCAL1 | ||
}} | }} |
Latest revision as of 06:16, 20 September 2015
Short description: | p1@SMARCAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000444508_5end |
EntrezGene: | SMARCAL1 |
HGNC: | 11102 |
UniProt: | C9J8F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.03e-07 | 53 |
common lymphoid progenitor | 1.03e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.49e-07 | 52 |