FFCP PHASE1:Hg19::chr9:119158876..119158880,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-127bp_to_AJ420429_5end | |association_with_transcript=-127bp_to_AJ420429_5end | ||
|cluster_id=chr9:119158876..119158880,+ | |||
|description=CAGE_peak_68_at_PAPPA_5end | |description=CAGE_peak_68_at_PAPPA_5end | ||
|id=chr9:119158876..119158880,+ | |id=chr9:119158876..119158880,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.73e-12!42;CL:0000514!1.73e-12!42;CL:0002541!1.83e-12!3;CL:0002622!1.60e-11!3;CL:0000187!1.37e-10!54;CL:0000359!2.58e-10!32;CL:0000680!7.23e-10!57;CL:0000056!7.23e-10!57;CL:0000355!7.23e-10!57;CL:0000183!1.99e-09!59;CL:0000393!3.22e-09!60;CL:0000211!3.22e-09!60 | |ontology_enrichment_celltype=CL:0000192!1.73e-12!42;CL:0000514!1.73e-12!42;CL:0002541!1.83e-12!3;CL:0002622!1.60e-11!3;CL:0000187!1.37e-10!54;CL:0000359!2.58e-10!32;CL:0000680!7.23e-10!57;CL:0000056!7.23e-10!57;CL:0000355!7.23e-10!57;CL:0000183!1.99e-09!59;CL:0000393!3.22e-09!60;CL:0000211!3.22e-09!60 | ||
|ontology_enrichment_celltype_v019=CL:0002541;8.69e-18;3!CL:0002592;8.69e-18;3!CL:0000138;1.38e-09;6!CL:0000153;8.14e-07;9!CL:0000447;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.76e-18,3;CL:0002592,8.00e-18,3;CL:0000058,1.44e-09,6;CL:0000138,1.44e-09,6;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.10e-50;1!UBERON:0004872;2.11e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.83e-12!3;UBERON:0000920!1.83e-12!3;UBERON:0001637!1.44e-10!42;UBERON:0003509!1.44e-10!42;UBERON:0004572!1.44e-10!42;UBERON:0003124!2.79e-09!7;UBERON:0001134!5.13e-09!61;UBERON:0002036!5.13e-09!61;UBERON:0003082!5.13e-09!61;UBERON:0002385!1.24e-08!63;UBERON:0001015!1.24e-08!63;UBERON:0000383!1.24e-08!63;UBERON:0004573!5.67e-08!33;UBERON:0004571!5.67e-08!33;UBERON:0004872!7.64e-08!84;UBERON:0004290!1.81e-07!70;UBERON:0003498!1.89e-07!5;UBERON:0005985!1.89e-07!5;UBERON:0000486!5.49e-07!82;UBERON:0005631!8.49e-07!14;UBERON:0000158!8.49e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;8.69e-18;3!UBERON:0005985;8.69e-18;3!UBERON:0003124;8.69e-18;3!UBERON:0001621;8.69e-18;3!UBERON:0000920;8.69e-18;3!UBERON:0001987;1.06e-13;4!UBERON:0000478;2.56e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.65e-29,7;UBERON:0000920,6.76e-18,3;UBERON:0001621,8.00e-18,3;UBERON:0005631,3.41e-15,14;UBERON:0000158,3.41e-15,14;UBERON:0001987,1.29e-13,4;UBERON:0004340,1.29e-13,4;UBERON:0003498,2.94e-11,5;UBERON:0005985,2.94e-11,5;UBERON:0000478,2.56e-09,24 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,1.58510321173008,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41923792260222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p68@PAPPA | |short_description=p68@PAPPA | ||
}} | }} |
Latest revision as of 18:04, 24 September 2015
Short description: | p68@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_68_at_PAPPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -127bp_to_AJ420429_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.76e-18 | 3 |
smooth muscle cell of the coronary artery | 8.00e-18 | 3 |
chondroblast | 1.44e-09 | 6 |
chondrocyte | 1.44e-09 | 6 |
GAG secreting cell | 8.37e-07 | 9 |
carbohydrate secreting cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.65e-29 | 7 |
egg chorion | 6.76e-18 | 3 |
coronary artery | 8.00e-18 | 3 |
extraembryonic membrane | 3.41e-15 | 14 |
membranous layer | 3.41e-15 | 14 |
placenta | 1.29e-13 | 4 |
allantois | 1.29e-13 | 4 |
heart blood vessel | 2.94e-11 | 5 |
coronary vessel | 2.94e-11 | 5 |
extraembryonic structure | 2.56e-09 | 24 |