FFCP PHASE1:Hg19::chr2:29439959..29439970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29439959..29439970,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_at_chr2:29439959..29439970,- | |description=CAGE_peak_at_chr2:29439959..29439970,- | ||
|id=chr2:29439959..29439970,- | |id=chr2:29439959..29439970,- | ||
|ontology_enrichment_celltype=CL:0000047!1.56e-10!8;CL:0002319!2.40e-08!25;CL:0000540!2.82e-08!6;CL:0000031!2.82e-08!6;CL:0000404!2.82e-08!6;CL:0002619!7.90e-08!3;CL:0002605!1.54e-07!3 | |ontology_enrichment_celltype=CL:0000047!1.56e-10!8;CL:0002319!2.40e-08!25;CL:0000540!2.82e-08!6;CL:0000031!2.82e-08!6;CL:0000404!2.82e-08!6;CL:0002619!7.90e-08!3;CL:0002605!1.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10!DOID:0060058;3.02e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10;DOID:0060058,3.02e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.01e-22!94;UBERON:0001016!8.01e-22!94;UBERON:0001017!7.43e-19!82;UBERON:0001049!6.58e-18!57;UBERON:0005068!6.58e-18!57;UBERON:0006241!6.58e-18!57;UBERON:0007135!6.58e-18!57;UBERON:0005743!8.59e-18!86;UBERON:0002616!5.93e-15!59;UBERON:0002020!1.02e-14!34;UBERON:0003528!1.02e-14!34;UBERON:0000956!1.11e-13!25;UBERON:0000203!1.11e-13!25;UBERON:0000955!3.87e-12!69;UBERON:0006238!3.87e-12!69;UBERON:0002780!6.10e-12!41;UBERON:0001890!6.10e-12!41;UBERON:0006240!6.10e-12!41;UBERON:0003080!1.30e-11!42;UBERON:0002148!8.23e-11!2;UBERON:0009662!8.23e-11!2;UBERON:0003075!8.82e-11!86;UBERON:0007284!8.82e-11!86;UBERON:0001869!1.87e-10!32;UBERON:0002346!3.70e-10!90;UBERON:0002791!4.20e-10!33;UBERON:0004121!4.64e-10!169;UBERON:0002298!7.10e-10!8;UBERON:0001893!9.02e-10!34;UBERON:0000924!1.02e-09!173;UBERON:0006601!1.02e-09!173;UBERON:0002619!1.66e-09!22;UBERON:0003076!6.83e-08!15;UBERON:0003057!6.83e-08!15;UBERON:0001950!9.26e-08!20;UBERON:0002771!1.59e-07!3;UBERON:0000988!1.75e-07!3;UBERON:0006331!1.75e-07!3;UBERON:0003056!2.02e-07!61;UBERON:0001896!2.67e-07!3;UBERON:0005290!2.67e-07!3;UBERON:0010096!2.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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|short_description=p@chr2:29439959..29439970,- | |short_description=p@chr2:29439959..29439970,- | ||
}} | }} |
Latest revision as of 09:28, 29 July 2015
Short description: | p@chr2:29439959..29439970, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29439959..29439970, - |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |
lymphoma | 3.02e-11 | 10 |