FFCP PHASE1:Hg19::chr2:47300320..47300323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:47300320..47300323,+ | |||
|coexpression_cluster_id=C3537 | |||
|description=CAGE_peak_at_chr2:47300320..47300323,+ | |description=CAGE_peak_at_chr2:47300320..47300323,+ | ||
|id=chr2:47300320..47300323,+ | |id=chr2:47300320..47300323,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.70e-85!42;CL:0000860!8.51e-79!45;CL:0002194!6.81e-59!63;CL:0000576!6.81e-59!63;CL:0000040!6.81e-59!63;CL:0000559!6.81e-59!63;CL:0000766!5.71e-57!76;CL:0002009!5.71e-57!65;CL:0000839!1.24e-52!70;CL:0000557!7.70e-52!71;CL:0002087!2.10e-37!119;CL:0000763!2.72e-37!112;CL:0000049!2.72e-37!112;CL:0000738!1.76e-36!140;CL:0002031!2.22e-30!124;CL:0000037!8.34e-29!172;CL:0000566!8.34e-29!172;CL:0000988!5.91e-27!182;CL:0002032!7.18e-26!165;CL:0000837!7.18e-26!165;CL:0002393!4.65e-18!9;CL:0002397!4.65e-18!9;CL:0000134!3.50e-11!358;CL:0002320!7.25e-11!365;CL:0000767!5.25e-10!3;CL:0000219!9.50e-10!390;CL:0000842!3.24e-09!3;CL:0000048!2.08e-08!430;CL:0000723!3.22e-08!436;CL:0000034!5.69e-08!444;CL:0000224!4.03e-07!4 | |ontology_enrichment_celltype=CL:0002057!9.70e-85!42;CL:0000860!8.51e-79!45;CL:0002194!6.81e-59!63;CL:0000576!6.81e-59!63;CL:0000040!6.81e-59!63;CL:0000559!6.81e-59!63;CL:0000766!5.71e-57!76;CL:0002009!5.71e-57!65;CL:0000839!1.24e-52!70;CL:0000557!7.70e-52!71;CL:0002087!2.10e-37!119;CL:0000763!2.72e-37!112;CL:0000049!2.72e-37!112;CL:0000738!1.76e-36!140;CL:0002031!2.22e-30!124;CL:0000037!8.34e-29!172;CL:0000566!8.34e-29!172;CL:0000988!5.91e-27!182;CL:0002032!7.18e-26!165;CL:0000837!7.18e-26!165;CL:0002393!4.65e-18!9;CL:0002397!4.65e-18!9;CL:0000134!3.50e-11!358;CL:0002320!7.25e-11!365;CL:0000767!5.25e-10!3;CL:0000219!9.50e-10!390;CL:0000842!3.24e-09!3;CL:0000048!2.08e-08!430;CL:0000723!3.22e-08!436;CL:0000034!5.69e-08!444;CL:0000224!4.03e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000767;2.62e-23;3!CL:0002393;2.59e-12;6!CL:0002397;2.59e-12;6!CL:0000094;1.24e-09;8!CL:0000081;2.32e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.62e-23,3;CL:0000094,1.24e-09,8;CL:0000766,3.42e-09,72;CL:0002393,1.12e-08,9;CL:0002397,1.12e-08,9;CL:0000860,2.17e-07,42;CL:0002057,2.17e-07,42;CL:0000081,2.32e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.44e-45!80;UBERON:0002390!2.37e-44!102;UBERON:0003061!2.37e-44!102;UBERON:0001474!4.18e-42!86;UBERON:0002193!5.38e-40!112;UBERON:0004765!3.15e-35!101;UBERON:0001434!3.15e-35!101;UBERON:0002405!4.39e-33!115;UBERON:0002204!1.58e-19!167;UBERON:0003081!1.95e-18!216;UBERON:0002384!1.96e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:47300320..47300323,+ | |short_description=p@chr2:47300320..47300323,+ | ||
}} | }} |
Latest revision as of 10:34, 29 July 2015
Short description: | p@chr2:47300320..47300323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:47300320..47300323, + |
Coexpression cluster: | C3537_Basophils_CD14_CD14CD16_Peripheral_immature_Whole_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.62e-23 | 3 |
granulocyte | 1.24e-09 | 8 |
myeloid leukocyte | 3.42e-09 | 72 |
intermediate monocyte | 1.12e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.12e-08 | 9 |
classical monocyte | 2.17e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-07 | 42 |
blood cell | 2.32e-07 | 11 |