FFCP PHASE1:Hg19::chr3:10086785..10086789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2177 | |EntrezGene=2177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3585 | |HGNC=3585 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-421bp_to_ENST00000483276_5end | |association_with_transcript=-421bp_to_ENST00000483276_5end | ||
|cluster_id=chr3:10086785..10086789,+ | |||
|description=CAGE_peak_3_at_FANCD2_5end | |description=CAGE_peak_3_at_FANCD2_5end | ||
|id=chr3:10086785..10086789,+ | |id=chr3:10086785..10086789,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.39e-08!53;CL:0000051!1.39e-08!53;CL:0000838!3.66e-08!52;CL:0002032!9.88e-08!165;CL:0000837!9.88e-08!165;CL:0000037!3.64e-07!172;CL:0000566!3.64e-07!172;CL:0000988!3.73e-07!182;CL:0000945!8.81e-07!24;CL:0000826!8.81e-07!24 | |ontology_enrichment_celltype=CL:0000542!1.39e-08!53;CL:0000051!1.39e-08!53;CL:0000838!3.66e-08!52;CL:0002032!9.88e-08!165;CL:0000837!9.88e-08!165;CL:0000037!3.64e-07!172;CL:0000566!3.64e-07!172;CL:0000988!3.73e-07!182;CL:0000945!8.81e-07!24;CL:0000826!8.81e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.27e-08;1!CL:1000600;2.27e-08;1!CL:0000785;5.97e-08;1!CL:0000819;5.97e-08;1!CL:0000945;7.25e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.19e-08,1;CL:1000600,2.19e-08,1;CL:0000819,3.58e-08,1;CL:0000945,7.90e-07,24;CL:0000826,7.90e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.18e-16!235;DOID:14566!2.61e-15!239;DOID:2531!1.81e-11!51;DOID:0060083!1.81e-11!51;DOID:0050687!2.01e-09!143;DOID:1240!5.21e-08!39;DOID:0050686!2.94e-07!137;DOID:305!3.99e-07!106 | |ontology_enrichment_disease=DOID:162!3.18e-16!235;DOID:14566!2.61e-15!239;DOID:2531!1.81e-11!51;DOID:0060083!1.81e-11!51;DOID:0050687!2.01e-09!143;DOID:1240!5.21e-08!39;DOID:0050686!2.94e-07!137;DOID:305!3.99e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:0060073;5.97e-08;1!DOID:8675;5.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.58e-08,1;DOID:8675,3.58e-08,1;DOID:2531,2.62e-07,51;DOID:0060083,2.62e-07,51;DOID:0060058,8.91e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.77e-10!9;UBERON:0001557!4.11e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.27e-08;1!UBERON:0001256;2.27e-08;1!UBERON:0001259;2.27e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.19e-08,1;UBERON:0001256,2.19e-08,1;UBERON:0001259,2.19e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.87879847716362,0.458480434487708,0.738905305049512,0.314843125254717,0,0,0,0,0,0,2.01414721508784,2.41687695228617,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,1.94826728407911,0,0.294605907474837,0,0,0.768547918354051,0.650296737799391,1.97325485524411,1.10540007114339,0,0.14828656316206,0,3.1360657141493,0,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.561803226808994,0.204154171254893,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0,0,1.20036438433761,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,0.723033089650446,0.882351781859152,0.653638332277218,0.474541238222193,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,1.53481913652154,0.261435451024901,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,1.65403886981437,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.822724546172388,0,0,0,0.213648142254946,0,1.22520107990516,0.185803175125719,0,0.0711418433484141,0,1.59663497146253,0.191505370132367,0.211673582723883,0.649243880549111,0,4.33645890163065,1.09675927041116,0,0,0.963528450622197,1.21079824314629,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0.222617410045812,0.824019371133798,2.32237948940793,0,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0.520855522170466,0.174919999992391,0,0,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0.544692317594951,0,0.0769502585037971,0,0,1.34636466614658,0.108647371922008,0,0,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0.335643173951685,0.189753732724185,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,1.82454789215666,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0.171986032471617,0.870806981601766,0.438535902517113,0.328461828212837,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0.343609788497747,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.677386656526276,0,0,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.499921631848426,0,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,1.53744911152768,0,0,0,0.194860308839388,0,0,0.655219697692825,0,0,0.19998739585493,0,0,0,0,0,0,1.53473245564382,0,0,0,0.169732529954025,0,0.247871528518004,0,0,1.49837315502381,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0.175871244359621,0.383287282918786,0,0,0,0,0,0.345701962667338,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,1.42212250559454,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0.647428837187895,0,1.1598144313382,0,0,0.397901550322736,0,0.11294608203896,2.19881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.327796715891087,0,0.407955318967927,0,0,0,0,0.535928260312357,0,0,0.213233981900981,0,0,0.1241494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| ||
|short_description=p3@FANCD2 | |short_description=p3@FANCD2 | ||
}} | }} |
Latest revision as of 06:25, 19 September 2015
Short description: | p3@FANCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FANCD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -421bp_to_ENST00000483276_5end |
EntrezGene: | FANCD2 |
HGNC: | 3585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.19e-08 | 1 |
lower urinary tract cell | 2.19e-08 | 1 |
B-1 B cell | 3.58e-08 | 1 |
lymphocyte of B lineage | 7.90e-07 | 24 |
pro-B cell | 7.90e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.19e-08 | 1 |
wall of urinary bladder | 2.19e-08 | 1 |
mucosa of urinary bladder | 2.19e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.58e-08 | 1 |
lymphosarcoma | 3.58e-08 | 1 |
hematologic cancer | 2.62e-07 | 51 |
immune system cancer | 2.62e-07 | 51 |
lymphoma | 8.91e-07 | 10 |