FFCP PHASE1:Hg19::chr3:149824547..149824554,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:149824547..149824554,- | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_at_chr3:149824547..149824554,- | |description=CAGE_peak_at_chr3:149824547..149824554,- | ||
|id=chr3:149824547..149824554,- | |id=chr3:149824547..149824554,- | ||
|ontology_enrichment_celltype=CL:0002568!2.37e-29!1;CL:0000062!2.18e-11!11;CL:0000375!2.18e-11!11;CL:0000335!2.18e-11!11;CL:0000346!7.42e-11!3;CL:1000428!7.42e-11!3;CL:0002605!8.99e-11!3;CL:0002559!1.82e-08!4;CL:0000306!2.43e-08!4;CL:0002222!2.43e-08!4;CL:0002224!2.43e-08!4;CL:0000243!1.33e-07!15;CL:0000125!1.33e-07!15;CL:0000030!1.33e-07!15;CL:0000339!1.33e-07!15;CL:0000095!6.77e-07!17;CL:0000123!6.77e-07!17 | |ontology_enrichment_celltype=CL:0002568!2.37e-29!1;CL:0000062!2.18e-11!11;CL:0000375!2.18e-11!11;CL:0000335!2.18e-11!11;CL:0000346!7.42e-11!3;CL:1000428!7.42e-11!3;CL:0002605!8.99e-11!3;CL:0002559!1.82e-08!4;CL:0000306!2.43e-08!4;CL:0002222!2.43e-08!4;CL:0002224!2.43e-08!4;CL:0000243!1.33e-07!15;CL:0000125!1.33e-07!15;CL:0000030!1.33e-07!15;CL:0000339!1.33e-07!15;CL:0000095!6.77e-07!17;CL:0000123!6.77e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.09e-30;9!CL:0000346;3.27e-23;3!CL:1000428;3.27e-23;3!CL:0002559;1.60e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.49e-25,11;CL:0000375,5.49e-25,11;CL:0000335,5.49e-25,11;CL:0000346,3.27e-23,3;CL:1000428,3.27e-23,3;CL:0002559,1.60e-14,5 | |||
|ontology_enrichment_development_v019=CL:0000335;5.49e-25;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000412!7.42e-11!3;UBERON:0001992!7.42e-11!3;UBERON:0002073!1.82e-08!4;UBERON:0005086!1.82e-08!4;UBERON:0010077!2.43e-08!4;UBERON:0005389!2.43e-08!4;UBERON:0000484!2.43e-08!4;UBERON:0002546!2.43e-08!4;UBERON:0000965!2.43e-08!4;UBERON:0001803!2.43e-08!4;UBERON:0003073!2.43e-08!4;UBERON:0005426!2.43e-08!4 | |ontology_enrichment_uberon=UBERON:0000412!7.42e-11!3;UBERON:0001992!7.42e-11!3;UBERON:0002073!1.82e-08!4;UBERON:0005086!1.82e-08!4;UBERON:0010077!2.43e-08!4;UBERON:0005389!2.43e-08!4;UBERON:0000484!2.43e-08!4;UBERON:0002546!2.43e-08!4;UBERON:0000965!2.43e-08!4;UBERON:0001803!2.43e-08!4;UBERON:0003073!2.43e-08!4;UBERON:0005426!2.43e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.27e-23;3!UBERON:0001992;3.27e-23;3!UBERON:0001474;9.05e-16;18!UBERON:0002073;1.60e-14;5!UBERON:0004765;2.77e-11;26!UBERON:0002067;1.12e-08;9!UBERON:0001434;1.25e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.27e-23,3;UBERON:0001992,3.27e-23,3;UBERON:0002073,1.60e-14,5;UBERON:0005086,1.60e-14,5;UBERON:0002067,1.12e-08,9;UBERON:0004016,1.12e-08,9;UBERON:0010083,1.12e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09883357782012,1.89771849817352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09883357782012,1.89771849817352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:149824547..149824554,- | |short_description=p@chr3:149824547..149824554,- | ||
}} | }} |
Latest revision as of 16:58, 29 July 2015
Short description: | p@chr3:149824547..149824554, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:149824547..149824554, - |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.49e-25 | 11 |
osteoprogenitor cell | 5.49e-25 | 11 |
mesenchyme condensation cell | 5.49e-25 | 11 |
hair follicle dermal papilla cell | 3.27e-23 | 3 |
stem cell of epidermis | 3.27e-23 | 3 |
hair follicle cell | 1.60e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.27e-23 | 3 |
papillary layer of dermis | 3.27e-23 | 3 |
hair follicle | 1.60e-14 | 5 |
hair follicle placode | 1.60e-14 | 5 |
dermis | 1.12e-08 | 9 |
dermatome | 1.12e-08 | 9 |
future dermis | 1.12e-08 | 9 |