FFCP PHASE1:Hg19::chr3:31149741..31149743,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:31149741..31149743,- | |||
|description=CAGE_peak_at_chr3:31149741..31149743,- | |description=CAGE_peak_at_chr3:31149741..31149743,- | ||
|id=chr3:31149741..31149743,- | |id=chr3:31149741..31149743,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.86e-09;11!CL:0000377;1.21e-08;3!UBERON:0009497;1.02e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.28e-23;1!DOID:1357;3.28e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.10e-23,1;DOID:1357,2.10e-23,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.28e-23;1!UBERON:0001825;3.28e-23;1!UBERON:0002106;8.96e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.10e-23,1;UBERON:0001825,2.10e-23,1;UBERON:0002106,8.96e-09,3;UBERON:0004854,8.96e-09,3;UBERON:0009034,8.96e-09,3;UBERON:0002095,8.96e-09,3;UBERON:0004782,8.96e-09,3;UBERON:0003281,8.96e-09,3;UBERON:0009664,8.96e-09,3;UBERON:0002296,8.96e-09,3;UBERON:0005602,8.96e-09,3;UBERON:0001179,8.96e-09,3;UBERON:0006293,8.96e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0,0.519254429183621,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,1.08890984861323,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05836791361941,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,1.72318727645497,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0.533034776018635,0,1.41282230755522,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0.394584402849391,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0,0,0.704815022316672,0,0,0,0.992332043623902,0,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.389720617678777,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,0.67767649223376,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,2.79835236589801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0,0.519254429183621,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,1.08890984861323,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05836791361941,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,1.72318727645497,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0.533034776018635,0,1.41282230755522,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0.394584402849391,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0,0,0.704815022316672,0,0,0,0.992332043623902,0,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.389720617678777,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,0.67767649223376,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,2.79835236589801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr3:31149741..31149743,- | |short_description=p@chr3:31149741..31149743,- | ||
}} | }} |
Latest revision as of 20:23, 29 July 2015
Short description: | p@chr3:31149741..31149743, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:31149741..31149743, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.10e-23 | 1 |
paranasal sinus | 2.10e-23 | 1 |
spleen | 8.96e-09 | 3 |
gastrointestinal system mesentery | 8.96e-09 | 3 |
stomach region | 8.96e-09 | 3 |
mesentery | 8.96e-09 | 3 |
gastrointestinal system serosa | 8.96e-09 | 3 |
mesentery of stomach | 8.96e-09 | 3 |
gut mesentery | 8.96e-09 | 3 |
dorsal mesentery | 8.96e-09 | 3 |
dorsal mesogastrium | 8.96e-09 | 3 |
peritoneal cavity | 8.96e-09 | 3 |
spleen primordium | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.10e-23 | 1 |
maxillary sinus cancer | 2.10e-23 | 1 |