FFCP PHASE1:Hg19::chr15:39887918..39887929,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:39887918..39887929,+
|short_description=p@chr15:39887918..39887929,+
|description=CAGE_peak_at_chr15:39887918..39887929,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39887918..39887929,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39887918..39887929,+ | |||
|id=chr15:39887918..39887929,+ | |||
|ontology_enrichment_celltype=CL:0002371!2.48e-15!591;CL:0000057!1.09e-14!75;CL:0000055!7.68e-14!180;CL:0002139!6.43e-13!24;CL:0000144!8.69e-13!625;CL:0000548!7.86e-11!679;CL:0000004!7.86e-11!679;CL:0000255!7.86e-11!679;CL:0000115!1.73e-10!35;CL:0000012!1.87e-10!682;CL:0000222!2.30e-10!119;CL:0000071!4.08e-09!18;CL:0002546!4.08e-09!18;CL:0000220!8.39e-09!246;CL:0002078!8.67e-09!44;CL:0002321!1.65e-08!248;CL:0002334!6.77e-08!12;CL:0002620!7.63e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002559;3.65e-11;5!CL:0002334;6.07e-11;12!CL:0000244;4.07e-09;4!CL:0000731;4.07e-09;4!CL:0002580;2.41e-08;3!CL:0002139;3.93e-08;24!CL:0000346;5.52e-08;3!CL:1000428;5.52e-08;3!CL:0000135;1.63e-07;3!CL:0000388;1.63e-07;3!CL:0002579;1.98e-07;3!CL:0002537;2.19e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-14,76;CL:0002559,3.76e-11,5;CL:0002334,4.65e-11,12;CL:0000244,3.48e-09,4;CL:0000731,3.48e-09,4;CL:0002139,2.36e-08,24;CL:0002580,2.58e-08,3;CL:0000346,4.39e-08,3;CL:1000428,4.39e-08,3;CL:0000135,1.21e-07,3;CL:0000388,1.21e-07,3;CL:0002579,1.44e-07,3;CL:0002537,3.01e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.31e-13!69;UBERON:0004872!2.48e-13!84;UBERON:0002049!5.63e-13!79;UBERON:0007798!5.63e-13!79;UBERON:0000468!8.66e-12!659;UBERON:0004535!9.89e-11!110;UBERON:0001981!1.02e-10!60;UBERON:0007500!1.02e-10!60;UBERON:0004537!1.02e-10!60;UBERON:0006965!1.02e-10!60;UBERON:0001009!2.10e-10!113;UBERON:0000467!3.75e-10!625;UBERON:0000480!4.96e-10!626;UBERON:0003102!6.65e-10!95;UBERON:0001986!4.08e-09!18;UBERON:0004638!4.08e-09!18;UBERON:0004852!4.08e-09!18;UBERON:0004923!8.24e-09!57;UBERON:0000487!8.58e-09!22;UBERON:0005631!3.99e-08!14;UBERON:0000158!3.99e-08!14;UBERON:0002199!4.67e-08!45;UBERON:0002416!4.67e-08!45;UBERON:0000490!5.13e-08!138;UBERON:0000486!6.66e-08!82;UBERON:0006914!6.91e-08!25;UBERON:0002097!1.10e-07!40;UBERON:0001637!5.08e-07!42;UBERON:0003509!5.08e-07!42;UBERON:0004572!5.08e-07!42;UBERON:0000478!5.21e-07!24;UBERON:0000914!6.45e-07!83;UBERON:0002329!6.45e-07!83;UBERON:0003077!6.45e-07!83;UBERON:0003059!6.45e-07!83;UBERON:0007282!6.45e-07!83;UBERON:0009618!6.45e-07!83;UBERON:0007285!6.45e-07!83;UBERON:0004871!7.31e-07!8;UBERON:0003914!9.24e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;3.65e-11;5!UBERON:0000412;5.52e-08;3!UBERON:0001992;5.52e-08;3!UBERON:0007846;1.63e-07;3!UBERON:0000043;1.63e-07;3!UBERON:0007845;1.63e-07;3!UBERON:0000365;2.83e-07;5!UBERON:0005631;3.76e-07;10!UBERON:0000158;3.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,3.76e-11,5;UBERON:0005086,3.76e-11,5;UBERON:0000412,4.39e-08,3;UBERON:0001992,4.39e-08,3;UBERON:0004923,4.59e-08,66;UBERON:0000055,6.98e-08,68;UBERON:0007846,1.21e-07,3;UBERON:0000043,1.21e-07,3;UBERON:0007845,1.21e-07,3;UBERON:0000365,2.51e-07,5;UBERON:0004872,4.82e-07,83;UBERON:0002097,6.92e-07,41;UBERON:0004871,7.67e-07,8;UBERON:0002199,9.19e-07,46;UBERON:0002416,9.19e-07,46 | |||
|phase1_expression=2.54349730978779,4.92431204949261,0.986680828671798,5.00366491765652,0.446961094427288,9.59572376510406,0,0,0.261185628199839,0.491467873003018,0,0.873765488520689,0.791300934685361,0.123766352960047,0,3.36162573225888,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0.257575567634187,0.145398238779565,0,0,0.464858073811369,0,0,1.7261543539329,0.256160706529101,0,2.06847408441971,0,0,0.564727018627814,0,0.224723484445085,1.53041946185451,0,0,0.329851300186716,0.199463657621632,0,3.19230162491442,0,0,0.75374599577023,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,0,1.00267582127178,0.724232594804119,0,0.486634870302636,0,0.665188192387692,0,0,0.364295288292542,1.11235332835329,0,0,0,0.238490624305342,0,0,0.993812036833525,0,0.347140501607594,2.26123176769604,0.838998872419812,0.825354125820202,1.46296476575767,1.8089173141853,0.71153252537342,0.66944122552934,0.402829317109147,0.760272105718513,1.95249646038536,1.47065232138347,1.62028389576352,1.3394959242612,0,0.563057402416611,1.53316637465883,0.949265659568129,1.64881569537367,0,0,0,7.45457927542978,2.02608818663328,1.05927344650575,0.573673241497627,0.354668382198357,0,5.33744978648525,0.98667019366864,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.61246251376468,0,0.103325781175765,1.18800285728205,3.70900393917835,0,0.718618141816238,0,0.125118519871964,0.277064115484183,1.31693286264251,3.98434134538726,1.65261864797256,0.907457465280168,2.87023417102179,2.34913127700424,1.69545520927649,0.900273288253207,0.206105058476878,0.257640540045629,1.48893485065272,1.85653965465393,1.07180705677318,0.757301322732344,1.28869858099219,0.323292113637624,2.4850671476163,0.604512589365842,0.339121184620975,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,4.69348596989448,5.78916844373597,2.76269842704961,1.39310378409594,1.44375896333917,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.502644862058154,0.370353780634118,0,0,0,0,0,0.577465791044295,3.70388410061289,5.13686211033415,0,0,0,0,0,0,1.51183915378974,0.283550194484773,0.53735113621709,0,1.15014803749563,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,1.32969058292435,2.08014873822732,0,0,0,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,1.30303176000821,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.45579603071565,4.81758269752337,2.52323864054295,2.57711112983969,0,0,0,0.664225598535437,0.368738337083406,0.781952530212746,0,0,0,0,0.106727557803444,0,1.66435439510497,0.907170879989041,4.21783273291921,8.90079445070762,7.01650236082684,1.92208723883551,2.04682899626681,6.27330292460069,1.48418066444991,1.54209693802656,0.710246901252508,0,0.519254429183621,0.116210378459959,0.120859449591622,1.40354529212299,0.184161977871793,0.574072240823034,0.182091168006717,0,0,0,0,0,0,0,1.19065593693561,0.647747748306418,0,0,0,0,0,0.671624264166535,0.219259876645935,0,0,0,0.325378394664303,0,0,0.082509499920588,0.574265537996172,0.650060246036521,4.82051789532479,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0,0,0.330569830721956,0.192190067365106,0.638063562472921,0.30347334256665,0,0.62962469366128,0,0,0,0,0.18532421910392,0.429374660225974,0,0.632758849437452,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.409499734223957,0.424216295861138,0,0,0,1.31535265576129,0.578775534266688,0,0.811641507850816,1.8589409885985,0.281695602532241,0.286822704408103,0.491245205065606,1.78335525740625,0,0.422215270595328,0,0.379473173765715,0.349934720244983,0.288666338176536,0.670302275535787,0,0.0941438007767792,2.15252686335615,1.68471475667626,2.21715076768338,2.52695740227655,0,0,0,0,0.411362273086194,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,0.296964680832639,3.07160702099232,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0.449341755736634,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,0.457987967009312,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0,0,0,0.203996435272644,0,0,0,0,0.859530882839914,0,0,0,2.15361907373044,0.199679000498991,0,0,0.0671834724867263,1.44119953416961,0,0.0787831823072236,0,0.067403543854184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| ||
|short_description=p@chr15:39887918..39887929,+ | |||
}} | }} |
Latest revision as of 01:20, 25 July 2015
Short description: | p@chr15:39887918..39887929, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39887918..39887929, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-14 | 76 |
hair follicle cell | 3.76e-11 | 5 |
preadipocyte | 4.65e-11 | 12 |
transitional epithelial cell | 3.48e-09 | 4 |
urothelial cell | 3.48e-09 | 4 |
endothelial cell of vascular tree | 2.36e-08 | 24 |
preadipocyte of the breast | 2.58e-08 | 3 |
hair follicle dermal papilla cell | 4.39e-08 | 3 |
stem cell of epidermis | 4.39e-08 | 3 |
fibrocyte | 1.21e-07 | 3 |
tendon cell | 1.21e-07 | 3 |
omentum preadipocyte | 1.44e-07 | 3 |
amnion mesenchymal stem cell | 3.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 3.76e-11 | 5 |
hair follicle placode | 3.76e-11 | 5 |
dermal papilla | 4.39e-08 | 3 |
papillary layer of dermis | 4.39e-08 | 3 |
organ component layer | 4.59e-08 | 66 |
vessel | 6.98e-08 | 68 |
dense regular connective tissue | 1.21e-07 | 3 |
tendon | 1.21e-07 | 3 |
regular connective tissue | 1.21e-07 | 3 |
urothelium | 2.51e-07 | 5 |
splanchnic layer of lateral plate mesoderm | 4.82e-07 | 83 |
skin of body | 6.92e-07 | 41 |
somatic layer of lateral plate mesoderm | 7.67e-07 | 8 |
integument | 9.19e-07 | 46 |
integumental system | 9.19e-07 | 46 |