FFCP PHASE1:Hg19::chr4:28669610..28669611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:28669610..28669611,+ | |||
|description=CAGE_peak_at_chr4:28669610..28669611,+ | |description=CAGE_peak_at_chr4:28669610..28669611,+ | ||
|id=chr4:28669610..28669611,+ | |id=chr4:28669610..28669611,+ | ||
|ontology_enrichment_celltype=CL:0000594!2.60e-16!3;CL:0000515!5.27e-13!4;CL:0000188!1.25e-09!9;CL:0002616!3.73e-07!1 | |ontology_enrichment_celltype=CL:0000594!2.60e-16!3;CL:0000515!5.27e-13!4;CL:0000188!1.25e-09!9;CL:0002616!3.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002615;3.27e-23;3!CL:0000515;3.27e-23;3!CL:0000056;8.69e-18;4!CL:0000680;8.99e-11;7!CL:0000128;8.99e-11;7!CL:0000126;8.99e-11;7!CL:0000127;8.99e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.09e-23,3;CL:0000515,7.35e-18,4;CL:0000128,8.99e-11,7;CL:0000126,8.99e-11,7;CL:0000127,8.99e-11,7;CL:0002453,8.99e-11,7 | |||
|ontology_enrichment_development_v019=CL:0000515;8.69e-18;4!UBERON:0006238;2.47e-07;10 | |||
|ontology_enrichment_disease=DOID:4235!4.43e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3093;7.92e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002081!1.44e-12!2;UBERON:0002148!1.13e-11!2;UBERON:0009662!1.13e-11!2;UBERON:0000200!8.13e-09!6;UBERON:0004151!1.17e-08!3;UBERON:0000988!4.55e-08!3;UBERON:0006331!4.55e-08!3;UBERON:0002702!3.52e-07!1;UBERON:0002134!3.95e-07!1;UBERON:0005208!3.95e-07!1;UBERON:0005946!3.95e-07!1;UBERON:0005965!3.95e-07!1;UBERON:0002078!3.95e-07!1;UBERON:0002079!4.18e-07!1;UBERON:0000998!4.69e-07!1;UBERON:0006868!4.69e-07!1 | |ontology_enrichment_uberon=UBERON:0002081!1.44e-12!2;UBERON:0002148!1.13e-11!2;UBERON:0009662!1.13e-11!2;UBERON:0000200!8.13e-09!6;UBERON:0004151!1.17e-08!3;UBERON:0000988!4.55e-08!3;UBERON:0006331!4.55e-08!3;UBERON:0002702!3.52e-07!1;UBERON:0002134!3.95e-07!1;UBERON:0005208!3.95e-07!1;UBERON:0005946!3.95e-07!1;UBERON:0005965!3.95e-07!1;UBERON:0002078!3.95e-07!1;UBERON:0002079!4.18e-07!1;UBERON:0000998!4.69e-07!1;UBERON:0006868!4.69e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.45e-12;6!UBERON:0002358;2.45e-12;6!UBERON:0003684;2.45e-12;6!UBERON:0001178;2.45e-12;6!UBERON:0004457;1.12e-08;9!UBERON:0000042;1.12e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.74e-12,6;UBERON:0002358,2.74e-12,6;UBERON:0003684,2.74e-12,6;UBERON:0001178,2.74e-12,6;UBERON:0004457,8.38e-07,12;UBERON:0000042,8.38e-07,12 | |||
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|short_description=p@chr4:28669610..28669611,+ | |short_description=p@chr4:28669610..28669611,+ | ||
}} | }} |
Latest revision as of 04:43, 30 July 2015
Short description: | p@chr4:28669610..28669611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:28669610..28669611, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.09e-23 | 3 |
skeletal muscle myoblast | 7.35e-18 | 4 |
oligodendrocyte | 8.99e-11 | 7 |
macroglial cell | 8.99e-11 | 7 |
astrocyte | 8.99e-11 | 7 |
oligodendrocyte precursor cell | 8.99e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.74e-12 | 6 |
peritoneum | 2.74e-12 | 6 |
abdominal cavity | 2.74e-12 | 6 |
visceral peritoneum | 2.74e-12 | 6 |
cavity lining | 8.38e-07 | 12 |
serous membrane | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.92e-07 | 11 |