FFCP PHASE1:Hg19::chr4:74257875..74257904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:74257875..74257904,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr4:74257875..74257904,+ | |description=CAGE_peak_at_chr4:74257875..74257904,+ | ||
|id=chr4:74257875..74257904,+ | |id=chr4:74257875..74257904,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.02e-15!12;CL:0000417!2.02e-15!12;CL:0000668!2.02e-15!12;CL:0000414!2.02e-15!12;CL:0000412!2.02e-15!12;CL:0000182!2.02e-15!12;CL:0000223!1.49e-08!59;CL:0002231!4.84e-08!3 | |ontology_enrichment_celltype=CL:0000181!2.02e-15!12;CL:0000417!2.02e-15!12;CL:0000668!2.02e-15!12;CL:0000414!2.02e-15!12;CL:0000412!2.02e-15!12;CL:0000182!2.02e-15!12;CL:0000223!1.49e-08!59;CL:0002231!4.84e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002231;9.45e-18;3!CL:0002563;8.81e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,8.00e-18,3;CL:0002563,8.82e-14,4;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;2.63e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.71e-17!19;UBERON:0006925!5.71e-17!19;UBERON:0008836!5.71e-17!19;UBERON:0008835!1.03e-14!22;UBERON:0003894!1.03e-14!22;UBERON:0009854!4.29e-14!23;UBERON:0003929!3.48e-13!54;UBERON:0007499!5.34e-13!25;UBERON:0009497!5.34e-13!25;UBERON:0000015!5.34e-13!25;UBERON:0002423!5.34e-13!25;UBERON:0006235!5.34e-13!25;UBERON:0004161!5.34e-13!25;UBERON:0005057!1.63e-12!26;UBERON:0009856!1.63e-12!26;UBERON:0002365!1.48e-10!31;UBERON:0002330!1.48e-10!31;UBERON:0002368!2.18e-09!35;UBERON:0005911!1.20e-08!82;UBERON:0002530!1.62e-08!59;UBERON:0000949!2.28e-07!45 | |ontology_enrichment_uberon=UBERON:0002107!5.71e-17!19;UBERON:0006925!5.71e-17!19;UBERON:0008836!5.71e-17!19;UBERON:0008835!1.03e-14!22;UBERON:0003894!1.03e-14!22;UBERON:0009854!4.29e-14!23;UBERON:0003929!3.48e-13!54;UBERON:0007499!5.34e-13!25;UBERON:0009497!5.34e-13!25;UBERON:0000015!5.34e-13!25;UBERON:0002423!5.34e-13!25;UBERON:0006235!5.34e-13!25;UBERON:0004161!5.34e-13!25;UBERON:0005057!1.63e-12!26;UBERON:0009856!1.63e-12!26;UBERON:0002365!1.48e-10!31;UBERON:0002330!1.48e-10!31;UBERON:0002368!2.18e-09!35;UBERON:0005911!1.20e-08!82;UBERON:0002530!1.62e-08!59;UBERON:0000949!2.28e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;8.81e-14;4!UBERON:0001262;8.81e-14;4!UBERON:0004786;8.81e-14;4!UBERON:0004808;8.81e-14;4!UBERON:0001277;8.81e-14;4!UBERON:0000485;1.89e-08;7!UBERON:0003929;1.89e-08;7!UBERON:0003350;1.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.82e-14,4;UBERON:0001262,8.82e-14,4;UBERON:0004786,8.82e-14,4;UBERON:0004808,8.82e-14,4;UBERON:0001277,8.82e-14,4;UBERON:0003929,3.61e-09,54;UBERON:0003350,1.49e-07,8;UBERON:0000485,7.48e-07,9 | |||
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|short_description=p@chr4:74257875..74257904,+ | |short_description=p@chr4:74257875..74257904,+ | ||
}} | }} |
Latest revision as of 06:33, 30 July 2015
Short description: | p@chr4:74257875..74257904, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74257875..74257904, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 8.00e-18 | 3 |
intestinal epithelial cell | 8.82e-14 | 4 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 8.82e-14 | 4 |
wall of intestine | 8.82e-14 | 4 |
gastrointestinal system mucosa | 8.82e-14 | 4 |
gastrointestinal system epithelium | 8.82e-14 | 4 |
intestinal epithelium | 8.82e-14 | 4 |
gut epithelium | 3.61e-09 | 54 |
epithelium of mucosa | 1.49e-07 | 8 |
simple columnar epithelium | 7.48e-07 | 9 |