FFCP PHASE1:Hg19::chr4:89299885..89299897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55008 | |EntrezGene=55008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26072 | |HGNC=26072 | ||
|TSSclassifier=strong | |||
|UniProt=C9JJI9,Q8IVU3 | |UniProt=C9JJI9,Q8IVU3 | ||
|association_with_transcript=0bp_to_ENST00000273960,ENST00000380265,ENST00000438983,ENST00000511939,NM_001165136,NM_017912,uc003hrp.1,uc011cdi.1,uc011cdj.1,uc011cdk.1,uc011cdl.1_5end | |association_with_transcript=0bp_to_ENST00000273960,ENST00000380265,ENST00000438983,ENST00000511939,NM_001165136,NM_017912,uc003hrp.1,uc011cdi.1,uc011cdj.1,uc011cdk.1,uc011cdl.1_5end | ||
|cluster_id=chr4:89299885..89299897,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_HERC6_5end | |description=CAGE_peak_6_at_HERC6_5end | ||
|id=chr4:89299885..89299897,+ | |id=chr4:89299885..89299897,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.18e-17!140;CL:0000766!5.17e-15!76;CL:0002031!2.22e-14!124;CL:0002087!4.57e-14!119;CL:0002032!2.81e-12!165;CL:0000837!2.81e-12!165;CL:0000839!2.89e-12!70;CL:0000037!3.78e-12!172;CL:0000566!3.78e-12!172;CL:0002057!5.31e-12!42;CL:0000860!1.40e-11!45;CL:0000557!4.72e-11!71;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0000988!1.79e-10!182;CL:0002009!6.01e-10!65;CL:0000763!5.52e-09!112;CL:0000049!5.52e-09!112 | |ontology_enrichment_celltype=CL:0000738!9.18e-17!140;CL:0000766!5.17e-15!76;CL:0002031!2.22e-14!124;CL:0002087!4.57e-14!119;CL:0002032!2.81e-12!165;CL:0000837!2.81e-12!165;CL:0000839!2.89e-12!70;CL:0000037!3.78e-12!172;CL:0000566!3.78e-12!172;CL:0002057!5.31e-12!42;CL:0000860!1.40e-11!45;CL:0000557!4.72e-11!71;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0000988!1.79e-10!182;CL:0002009!6.01e-10!65;CL:0000763!5.52e-09!112;CL:0000049!5.52e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.73e-10;33!CL:0002057;3.73e-10;33!CL:0000771;4.36e-09;2!CL:0000473;4.21e-08;39!CL:0000234;4.21e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,4.30e-09,2;CL:0000473,1.87e-08,48;CL:0000234,1.87e-08,48;CL:0000860,2.63e-08,42;CL:0002057,2.63e-08,42;CL:0000766,6.78e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-11!102;UBERON:0003061!3.19e-11!102;UBERON:0002193!4.23e-11!112;UBERON:0002371!2.64e-10!80;UBERON:0001474!1.65e-09!86;UBERON:0004765!2.73e-09!101;UBERON:0001434!2.73e-09!101;UBERON:0002405!3.93e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!3.19e-11!102;UBERON:0003061!3.19e-11!102;UBERON:0002193!4.23e-11!112;UBERON:0002371!2.64e-10!80;UBERON:0001474!1.65e-09!86;UBERON:0004765!2.73e-09!101;UBERON:0001434!2.73e-09!101;UBERON:0002405!3.93e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,7.16e-07,90;UBERON:0001434,8.18e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.868043482863407,0.223915474239924,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0.863077176966451,0.256160706529101,0,2.41321976515633,0,0,0.188242339542605,0,0.224723484445085,8.26426509401437,3.53021929783703,4.47535988059329,0.989553900560148,0.199463657621632,0.426224750532694,17.7027635563436,4.53908179752912,8.09668923694247,0.502497330513487,0.521482918420201,0.434377689410233,24.2159801053348,15.8359383474653,17.4054313092486,0,0.850417199860174,0.419317291016752,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0.730656615058536,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,1.32208974556972,0,1.1384259382189,0,0.382273228125229,0,1.68152568894461,0.263384084775077,0.590129310341499,0,0.411202997999018,0.334372990781356,0.32592226663359,0,0,0.334231370655521,0.294605907474837,1.32920336750173,0.270803863765016,0.768547918354051,0.390178042679635,0.986627427622057,0,0.289803085735052,0.741432815810302,0.267540828089713,0,0.453237370790265,0,1.03088233644789,0.759059076058509,0,0,0,0.602300476311091,0.511946444617674,1.24930726552346,0.473554504088034,0,0.80642697289893,1.33720097891754,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0.44905874525234,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0,0,2.37600571456411,1.7308685049499,0,0,0,0.125118519871964,0,0,0,1.50238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0.721832238805369,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,1.6798212819886,1.27597587518148,0,0,0,0.492663237895943,0.528290604079356,0.207328115540772,0.288239906833923,0.12624243342638,0.126995788584338,0.763976851116555,0,0,0.102827492703324,0,1.71495859578347,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0.394061520403854,0.862510299438069,0.641715181398742,0,0,0,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.328508624055237,1.03850885836724,0.348631135379878,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.515205058238611,0,0.247528499761764,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,2.7723022215848,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,7.31140468893853,0,0,0,0,0.551365343546124,0,1.75380354101505,0,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0.459446800413919,0,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.561421621224659,0.439524537815682,0,0,0,0.71623345421307,0,0,0,0.281338832821026,1.22439575525196,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,3.75808548536231,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.387956065953678,0,0,0,0.19871461170299,0.379864775735272,1.95551382734803,0,0.426905989478705,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.262272940674991,1.90080605734932,0,0,0.714695326373367,0,0,0,0,0,0,1.06720276974141,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,5.74507131993164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|short_description=p6@HERC6 | |short_description=p6@HERC6 | ||
}} | }} |
Latest revision as of 07:31, 19 September 2015
Short description: | p6@HERC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HERC6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000273960, ENST00000380265, ENST00000438983, ENST00000511939, NM_001165136, NM_017912, uc003hrp.1, uc011cdi.1, uc011cdj.1, uc011cdk.1, uc011cdl.1_5end |
EntrezGene: | HERC6 |
HGNC: | 26072 |
UniProt: | C9JJI9Q8IVU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 4.30e-09 | 2 |
defensive cell | 1.87e-08 | 48 |
phagocyte | 1.87e-08 | 48 |
classical monocyte | 2.63e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-08 | 42 |
myeloid leukocyte | 6.78e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 7.16e-07 | 90 |
skeletal system | 8.18e-07 | 100 |