FFCP PHASE1:Hg19::chr5:102090346..102090364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5066 | |EntrezGene=5066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |HGNC=8596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000508060_5end | |association_with_transcript=-6bp_to_ENST00000508060_5end | ||
|cluster_id=chr5:102090346..102090364,+ | |||
|description=CAGE_peak_28_at_PAM_5end | |description=CAGE_peak_28_at_PAM_5end | ||
|id=chr5:102090346..102090364,+ | |id=chr5:102090346..102090364,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.84e-34;1!UBERON:0006215;2.59e-12;3!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.87e-11!94;UBERON:0001016!3.87e-11!94;UBERON:0007023!1.22e-10!115;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0003076!2.76e-10!15;UBERON:0003057!2.76e-10!15;UBERON:0005743!2.80e-10!86;UBERON:0004732!1.17e-09!13;UBERON:0002680!2.03e-09!9;UBERON:0001895!2.03e-09!9;UBERON:0010092!2.03e-09!9;UBERON:0001017!3.42e-09!82;UBERON:0001049!3.82e-09!57;UBERON:0005068!3.82e-09!57;UBERON:0006241!3.82e-09!57;UBERON:0007135!3.82e-09!57;UBERON:0003075!8.02e-09!86;UBERON:0007284!8.02e-09!86;UBERON:0002346!3.97e-08!90;UBERON:0002616!1.28e-07!59;UBERON:0000955!3.94e-07!69;UBERON:0006238!3.94e-07!69;UBERON:0004121!8.76e-07!169 | |ontology_enrichment_uberon=UBERON:0000073!3.87e-11!94;UBERON:0001016!3.87e-11!94;UBERON:0007023!1.22e-10!115;UBERON:0004733!1.27e-10!12;UBERON:0002028!1.27e-10!12;UBERON:0007277!1.27e-10!12;UBERON:0003076!2.76e-10!15;UBERON:0003057!2.76e-10!15;UBERON:0005743!2.80e-10!86;UBERON:0004732!1.17e-09!13;UBERON:0002680!2.03e-09!9;UBERON:0001895!2.03e-09!9;UBERON:0010092!2.03e-09!9;UBERON:0001017!3.42e-09!82;UBERON:0001049!3.82e-09!57;UBERON:0005068!3.82e-09!57;UBERON:0006241!3.82e-09!57;UBERON:0007135!3.82e-09!57;UBERON:0003075!8.02e-09!86;UBERON:0007284!8.02e-09!86;UBERON:0002346!3.97e-08!90;UBERON:0002616!1.28e-07!59;UBERON:0000955!3.94e-07!69;UBERON:0006238!3.94e-07!69;UBERON:0004121!8.76e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.05e-34;1!UBERON:0002133;9.07e-18;2!UBERON:0003978;2.59e-12;3!UBERON:0000946;2.59e-12;3!UBERON:0000948;5.09e-07;22!UBERON:0002037;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,7.06e-34,1;UBERON:0002133,1.07e-17,2;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0002037,8.48e-07,6;UBERON:0006215,8.48e-07,6 | |||
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| ||
|short_description=p28@PAM | |short_description=p28@PAM | ||
}} | }} |
Latest revision as of 12:45, 19 September 2015
Short description: | p28@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000508060_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 7.06e-34 | 1 |
atrioventricular valve | 1.07e-17 | 2 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
cerebellum | 8.48e-07 | 6 |
rhombic lip | 8.48e-07 | 6 |