FFCP PHASE1:Hg19::chr6:100644722..100644724,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:100644722..100644724,- | |||
|description=CAGE_peak_at_chr6:100644722..100644724,- | |description=CAGE_peak_at_chr6:100644722..100644724,- | ||
|id=chr6:100644722..100644724,- | |id=chr6:100644722..100644724,- | ||
|ontology_enrichment_celltype=CL:0000066!1.44e-14!254;CL:0002251!1.71e-14!21;CL:0002076!1.97e-12!43;CL:0000223!3.50e-10!59;CL:0002178!1.19e-07!3;CL:0000039!4.23e-07!7;CL:0000586!4.23e-07!7;CL:0000082!6.67e-07!19;CL:0002553!8.21e-07!1 | |ontology_enrichment_celltype=CL:0000066!1.44e-14!254;CL:0002251!1.71e-14!21;CL:0002076!1.97e-12!43;CL:0000223!3.50e-10!59;CL:0002178!1.19e-07!3;CL:0000039!4.23e-07!7;CL:0000586!4.23e-07!7;CL:0000082!6.67e-07!19;CL:0002553!8.21e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002231;9.45e-18;3!CL:0002563;1.13e-13;4!CL:0002076;3.23e-11;42!CL:0002251;5.42e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,9.46e-18,3;CL:0002563,1.00e-13,4;CL:0002076,1.56e-11,42;CL:0002251,5.16e-11,20;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;8.03e-08;58 | |||
|ontology_enrichment_disease=DOID:305!4.66e-30!106;DOID:1749!7.59e-23!14;DOID:0050687!9.24e-21!143;DOID:162!1.69e-12!235;DOID:14566!4.12e-12!239;DOID:0050615!1.24e-11!16;DOID:3905!8.57e-10!9;DOID:1324!7.95e-09!15;DOID:1325!1.90e-07!7;DOID:3904!1.90e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.17e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.41e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!6.49e-21!4;UBERON:0004785!6.49e-21!4;UBERON:0003729!9.02e-17!5;UBERON:0000344!9.07e-11!12;UBERON:0000974!1.91e-08!10;UBERON:0004802!6.67e-07!19;UBERON:0000115!6.67e-07!19 | |ontology_enrichment_uberon=UBERON:0003343!6.49e-21!4;UBERON:0004785!6.49e-21!4;UBERON:0003729!9.02e-17!5;UBERON:0000344!9.07e-11!12;UBERON:0000974!1.91e-08!10;UBERON:0004802!6.67e-07!19;UBERON:0000115!6.67e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;8.81e-14;4!UBERON:0004785;8.81e-14;4!UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0000344;5.42e-11;20!UBERON:0000974;1.22e-09;6!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.82e-14,4;UBERON:0004785,8.82e-14,4;UBERON:0001242,1.00e-13,4;UBERON:0001262,1.00e-13,4;UBERON:0004786,1.00e-13,4;UBERON:0004808,1.00e-13,4;UBERON:0001277,1.00e-13,4;UBERON:0000344,5.16e-11,20;UBERON:0003350,1.59e-07,8;UBERON:0000485,7.91e-07,9 | |||
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|short_description=p@chr6:100644722..100644724,- | |short_description=p@chr6:100644722..100644724,- | ||
}} | }} |
Latest revision as of 17:44, 30 July 2015
Short description: | p@chr6:100644722..100644724, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:100644722..100644724, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 9.46e-18 | 3 |
intestinal epithelial cell | 1.00e-13 | 4 |
endo-epithelial cell | 1.56e-11 | 42 |
epithelial cell of alimentary canal | 5.16e-11 | 20 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.82e-14 | 4 |
respiratory system mucosa | 8.82e-14 | 4 |
intestinal mucosa | 1.00e-13 | 4 |
wall of intestine | 1.00e-13 | 4 |
gastrointestinal system mucosa | 1.00e-13 | 4 |
gastrointestinal system epithelium | 1.00e-13 | 4 |
intestinal epithelium | 1.00e-13 | 4 |
mucosa | 5.16e-11 | 20 |
epithelium of mucosa | 1.59e-07 | 8 |
simple columnar epithelium | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.41e-15 | 14 |