FFCP PHASE1:Hg19::chr6:138751931..138751940,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt=B4DS58 | |UniProt=B4DS58 | ||
|association_with_transcript=87bp_to_AK299585_5end | |association_with_transcript=87bp_to_AK299585_5end | ||
|cluster_id=chr6:138751931..138751940,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_46_at_NHSL1_5end | |description=CAGE_peak_46_at_NHSL1_5end | ||
|id=chr6:138751931..138751940,- | |id=chr6:138751931..138751940,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.29e-45!57;UBERON:0005068!3.29e-45!57;UBERON:0006241!3.29e-45!57;UBERON:0007135!3.29e-45!57;UBERON:0002616!1.18e-39!59;UBERON:0000955!1.06e-32!69;UBERON:0006238!1.06e-32!69;UBERON:0001017!2.46e-32!82;UBERON:0002298!1.27e-30!8;UBERON:0005743!1.31e-30!86;UBERON:0002020!2.51e-29!34;UBERON:0003528!2.51e-29!34;UBERON:0001893!4.16e-29!34;UBERON:0003075!2.47e-28!86;UBERON:0007284!2.47e-28!86;UBERON:0002780!2.91e-27!41;UBERON:0001890!2.91e-27!41;UBERON:0006240!2.91e-27!41;UBERON:0000073!2.99e-27!94;UBERON:0001016!2.99e-27!94;UBERON:0002346!7.53e-27!90;UBERON:0003080!1.52e-26!42;UBERON:0002791!3.53e-26!33;UBERON:0001869!4.85e-23!32;UBERON:0001950!3.21e-22!20;UBERON:0000033!1.02e-21!123;UBERON:0003076!6.70e-21!15;UBERON:0003057!6.70e-21!15;UBERON:0000153!1.85e-20!129;UBERON:0007811!1.85e-20!129;UBERON:0004733!3.01e-20!12;UBERON:0002028!3.01e-20!12;UBERON:0007277!3.01e-20!12;UBERON:0002619!3.98e-20!22;UBERON:0004732!1.28e-18!13;UBERON:0007023!4.17e-18!115;UBERON:0000956!1.37e-17!25;UBERON:0000203!1.37e-17!25;UBERON:0003056!2.55e-17!61;UBERON:0001896!2.04e-16!3;UBERON:0005290!2.04e-16!3;UBERON:0010096!2.04e-16!3;UBERON:0006331!3.98e-16!3;UBERON:0001871!4.00e-16!7;UBERON:0000988!8.13e-16!3;UBERON:0004121!1.23e-15!169;UBERON:0000924!3.79e-15!173;UBERON:0006601!3.79e-15!173;UBERON:0002420!2.56e-14!9;UBERON:0007245!2.56e-14!9;UBERON:0010009!2.56e-14!9;UBERON:0010011!2.56e-14!9;UBERON:0000454!2.56e-14!9;UBERON:0000025!2.64e-14!194;UBERON:0002308!3.57e-14!9;UBERON:0000125!3.57e-14!9;UBERON:0004111!1.97e-12!241;UBERON:0001876!1.01e-11!2;UBERON:0002148!1.89e-11!2;UBERON:0009662!1.89e-11!2;UBERON:0000477!2.08e-11!286;UBERON:0000483!4.67e-10!309;UBERON:0000475!6.68e-10!365;UBERON:0000119!6.76e-10!312;UBERON:0002680!2.85e-09!9;UBERON:0001895!2.85e-09!9;UBERON:0010092!2.85e-09!9;UBERON:0000064!6.23e-08!219;UBERON:0000200!7.33e-08!6;UBERON:0000481!2.07e-07!347;UBERON:0009663!4.09e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!3.29e-45!57;UBERON:0005068!3.29e-45!57;UBERON:0006241!3.29e-45!57;UBERON:0007135!3.29e-45!57;UBERON:0002616!1.18e-39!59;UBERON:0000955!1.06e-32!69;UBERON:0006238!1.06e-32!69;UBERON:0001017!2.46e-32!82;UBERON:0002298!1.27e-30!8;UBERON:0005743!1.31e-30!86;UBERON:0002020!2.51e-29!34;UBERON:0003528!2.51e-29!34;UBERON:0001893!4.16e-29!34;UBERON:0003075!2.47e-28!86;UBERON:0007284!2.47e-28!86;UBERON:0002780!2.91e-27!41;UBERON:0001890!2.91e-27!41;UBERON:0006240!2.91e-27!41;UBERON:0000073!2.99e-27!94;UBERON:0001016!2.99e-27!94;UBERON:0002346!7.53e-27!90;UBERON:0003080!1.52e-26!42;UBERON:0002791!3.53e-26!33;UBERON:0001869!4.85e-23!32;UBERON:0001950!3.21e-22!20;UBERON:0000033!1.02e-21!123;UBERON:0003076!6.70e-21!15;UBERON:0003057!6.70e-21!15;UBERON:0000153!1.85e-20!129;UBERON:0007811!1.85e-20!129;UBERON:0004733!3.01e-20!12;UBERON:0002028!3.01e-20!12;UBERON:0007277!3.01e-20!12;UBERON:0002619!3.98e-20!22;UBERON:0004732!1.28e-18!13;UBERON:0007023!4.17e-18!115;UBERON:0000956!1.37e-17!25;UBERON:0000203!1.37e-17!25;UBERON:0003056!2.55e-17!61;UBERON:0001896!2.04e-16!3;UBERON:0005290!2.04e-16!3;UBERON:0010096!2.04e-16!3;UBERON:0006331!3.98e-16!3;UBERON:0001871!4.00e-16!7;UBERON:0000988!8.13e-16!3;UBERON:0004121!1.23e-15!169;UBERON:0000924!3.79e-15!173;UBERON:0006601!3.79e-15!173;UBERON:0002420!2.56e-14!9;UBERON:0007245!2.56e-14!9;UBERON:0010009!2.56e-14!9;UBERON:0010011!2.56e-14!9;UBERON:0000454!2.56e-14!9;UBERON:0000025!2.64e-14!194;UBERON:0002308!3.57e-14!9;UBERON:0000125!3.57e-14!9;UBERON:0004111!1.97e-12!241;UBERON:0001876!1.01e-11!2;UBERON:0002148!1.89e-11!2;UBERON:0009662!1.89e-11!2;UBERON:0000477!2.08e-11!286;UBERON:0000483!4.67e-10!309;UBERON:0000475!6.68e-10!365;UBERON:0000119!6.76e-10!312;UBERON:0002680!2.85e-09!9;UBERON:0001895!2.85e-09!9;UBERON:0010092!2.85e-09!9;UBERON:0000064!6.23e-08!219;UBERON:0000200!7.33e-08!6;UBERON:0000481!2.07e-07!347;UBERON:0009663!4.09e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.48e-40;5!UBERON:0001950;6.74e-11;20!UBERON:0002619;4.42e-10;22!UBERON:0000956;4.34e-09;25!UBERON:0000203;4.34e-09;25!UBERON:0003528;2.32e-07;34!UBERON:0002791;2.32e-07;32!UBERON:0002020;2.32e-07;34!UBERON:0001869;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.48e-40,5;UBERON:0001950,6.74e-11,20;UBERON:0002619,4.42e-10,22;UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.110929051536852,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,4.03314713954749,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.110929051536852,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,4.03314713954749,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p46@NHSL1 | |short_description=p46@NHSL1 | ||
}} | }} |
Latest revision as of 04:57, 25 September 2015
Short description: | p46@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_46_at_NHSL1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 87bp_to_AK299585_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | B4DS58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.48e-40 | 5 |
neocortex | 6.74e-11 | 20 |
regional part of cerebral cortex | 4.42e-10 | 22 |
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |