FFCP PHASE1:Hg19::chr6:162477886..162477932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:162477886..162477932,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_at_chr6:162477886..162477932,- | |description=CAGE_peak_at_chr6:162477886..162477932,- | ||
|id=chr6:162477886..162477932,- | |id=chr6:162477886..162477932,- | ||
|ontology_enrichment_celltype=CL:0000064!7.42e-20!3;CL:0005012!7.42e-20!3;CL:0000067!7.42e-20!3;CL:0002304!7.42e-20!3;CL:0000214!4.32e-09!3;CL:0002550!2.07e-07!1;CL:0000946!3.84e-07!1;CL:0000786!3.84e-07!1;CL:0000980!3.84e-07!1 | |ontology_enrichment_celltype=CL:0000064!7.42e-20!3;CL:0005012!7.42e-20!3;CL:0000067!7.42e-20!3;CL:0002304!7.42e-20!3;CL:0000214!4.32e-09!3;CL:0002550!2.07e-07!1;CL:0000946!3.84e-07!1;CL:0000786!3.84e-07!1;CL:0000980!3.84e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000062;1.09e-15;9!CL:0000064;2.74e-12;3!CL:0000067;2.74e-12;3!CL:0005012;2.74e-12;3!CL:0002304;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,4.52e-13,11;CL:0000375,4.52e-13,11;CL:0000335,4.52e-13,11;CL:0000064,2.59e-12,3;CL:0000067,2.59e-12,3;CL:0005012,2.59e-12,3;CL:0002304,2.59e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!CL:0000335;4.95e-13;11 | |||
|ontology_enrichment_disease=DOID:4468!2.64e-13!2;DOID:178!2.83e-07!1;DOID:326!2.83e-07!1;DOID:3978!2.83e-07!1;DOID:3394!2.83e-07!1;DOID:5844!2.83e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.85e-12;3!DOID:3908;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.85e-12,3;DOID:3908,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001778!7.42e-20!3;UBERON:0001775!7.42e-20!3;UBERON:0000488!4.97e-15!4;UBERON:0002203!3.50e-10!6;UBERON:0001768!3.50e-10!6;UBERON:0006915!4.32e-09!3;UBERON:0002018!4.32e-09!3;UBERON:0002217!4.32e-09!3;UBERON:0007616!4.32e-09!3;UBERON:0001301!8.54e-08!1;UBERON:0002370!8.19e-07!4;UBERON:0005058!8.19e-07!4;UBERON:0009113!8.19e-07!4;UBERON:0003295!8.19e-07!4;UBERON:0005562!8.19e-07!4 | |ontology_enrichment_uberon=UBERON:0001778!7.42e-20!3;UBERON:0001775!7.42e-20!3;UBERON:0000488!4.97e-15!4;UBERON:0002203!3.50e-10!6;UBERON:0001768!3.50e-10!6;UBERON:0006915!4.32e-09!3;UBERON:0002018!4.32e-09!3;UBERON:0002217!4.32e-09!3;UBERON:0007616!4.32e-09!3;UBERON:0001301!8.54e-08!1;UBERON:0002370!8.19e-07!4;UBERON:0005058!8.19e-07!4;UBERON:0009113!8.19e-07!4;UBERON:0003295!8.19e-07!4;UBERON:0005562!8.19e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0001778;2.74e-12;3!UBERON:0006947;2.74e-12;3!UBERON:0001775;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4!UBERON:0000488;1.50e-09;4!UBERON:0001474;2.38e-08;18!UBERON:0002203;8.72e-07;6!UBERON:0001768;8.72e-07;6!UBERON:0002200;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.06e-34,1;UBERON:0001778,2.59e-12,3;UBERON:0001775,2.59e-12,3;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0000488,1.44e-09,4;UBERON:0005904,1.57e-09,4;UBERON:0002203,8.48e-07,6;UBERON:0001768,8.48e-07,6;UBERON:0002200,8.48e-07,6 | |||
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|short_description=p@chr6:162477886..162477932,- | |short_description=p@chr6:162477886..162477932,- | ||
}} | }} |
Latest revision as of 21:51, 30 July 2015
Short description: | p@chr6:162477886..162477932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:162477886..162477932, - |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 4.52e-13 | 11 |
osteoprogenitor cell | 4.52e-13 | 11 |
mesenchyme condensation cell | 4.52e-13 | 11 |
ciliated cell | 2.59e-12 | 3 |
ciliated epithelial cell | 2.59e-12 | 3 |
multi-ciliated epithelial cell | 2.59e-12 | 3 |
non-pigmented ciliary epithelial cell | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 7.06e-34 | 1 |
ciliary epithelium | 2.59e-12 | 3 |
ciliary body | 2.59e-12 | 3 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
atypical epithelium | 1.44e-09 | 4 |
duct of male reproductive system | 1.57e-09 | 4 |
vasculature of eye | 8.48e-07 | 6 |
uvea | 8.48e-07 | 6 |
vasculature of head | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.85e-12 | 3 |
non-small cell lung carcinoma | 5.35e-08 | 5 |