FFCP PHASE1:Hg19::chr7:76911466..76911478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57639 | |EntrezGene=57639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29296 | |HGNC=29296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-137bp_to_ENST00000461259,uc003ugc.2_5end | |association_with_transcript=-137bp_to_ENST00000461259,uc003ugc.2_5end | ||
|cluster_id=chr7:76911466..76911478,+ | |||
|coexpression_cluster_id=C1917 | |||
|description=CAGE_peak_4_at_CCDC146_5end | |description=CAGE_peak_4_at_CCDC146_5end | ||
|id=chr7:76911466..76911478,+ | |id=chr7:76911466..76911478,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.94e-15!3 | |ontology_enrichment_celltype=CL:0002541!4.94e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.44e-21;2!UBERON:0007123;3.22e-09;5 | |||
|ontology_enrichment_disease=DOID:4468!8.93e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.44e-21;2!DOID:3001;6.78e-08;6!DOID:299;2.31e-07;25!DOID:120;6.92e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.11e-21,2;DOID:3001,6.78e-08,6;DOID:299,2.28e-07,25;DOID:120,6.82e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.94e-15!3;UBERON:0000920!4.94e-15!3;UBERON:0003124!4.75e-14!7;UBERON:0003133!4.54e-13!48;UBERON:0001301!2.93e-12!1;UBERON:0006834!4.53e-12!1;UBERON:0005795!7.60e-12!22;UBERON:0004175!1.72e-10!25;UBERON:0005156!1.84e-10!59;UBERON:0000990!1.84e-10!59;UBERON:0002046!1.55e-09!5;UBERON:0004117!1.55e-09!5;UBERON:0007689!1.55e-09!5;UBERON:0007123!1.55e-09!5;UBERON:0003091!1.55e-09!5;UBERON:0003135!3.24e-09!11;UBERON:0000995!3.14e-08!21;UBERON:0003975!7.30e-08!22;UBERON:0005631!2.74e-07!14;UBERON:0000158!2.74e-07!14;UBERON:0003134!5.58e-07!37;UBERON:0000474!5.58e-07!37 | |ontology_enrichment_uberon=UBERON:0000476!4.94e-15!3;UBERON:0000920!4.94e-15!3;UBERON:0003124!4.75e-14!7;UBERON:0003133!4.54e-13!48;UBERON:0001301!2.93e-12!1;UBERON:0006834!4.53e-12!1;UBERON:0005795!7.60e-12!22;UBERON:0004175!1.72e-10!25;UBERON:0005156!1.84e-10!59;UBERON:0000990!1.84e-10!59;UBERON:0002046!1.55e-09!5;UBERON:0004117!1.55e-09!5;UBERON:0007689!1.55e-09!5;UBERON:0007123!1.55e-09!5;UBERON:0003091!1.55e-09!5;UBERON:0003135!3.24e-09!11;UBERON:0000995!3.14e-08!21;UBERON:0003975!7.30e-08!22;UBERON:0005631!2.74e-07!14;UBERON:0000158!2.74e-07!14;UBERON:0003134!5.58e-07!37;UBERON:0000474!5.58e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;8.10e-41;1!UBERON:0006947;1.31e-14;3!UBERON:0004054;1.31e-14;3!UBERON:0005904;2.66e-11;4!UBERON:0002046;3.22e-09;5!UBERON:0004175;1.39e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.91e-41,1;UBERON:0006947,1.40e-14,3;UBERON:0004054,1.40e-14,3;UBERON:0005904,2.80e-11,4;UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5;UBERON:0004175,2.35e-07,25;UBERON:0002113,4.28e-07,26;UBERON:0003918,4.28e-07,26;UBERON:0011143,4.28e-07,26;UBERON:0005095,4.28e-07,26;UBERON:0007687,4.28e-07,26 | |||
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|short_description=p4@CCDC146 | |short_description=p4@CCDC146 | ||
}} | }} |
Latest revision as of 14:28, 19 September 2015
Short description: | p4@CCDC146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC146_5end |
Coexpression cluster: | C1917_clear_epididymis_serous_uterus_kidney_B_ductus |
Association with transcript: | -137bp_to_ENST00000461259, uc003ugc.2_5end |
EntrezGene: | CCDC146 |
HGNC: | 29296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
epididymis | 9.91e-41 | 1 |
male genital duct | 1.40e-14 | 3 |
internal male genitalia | 1.40e-14 | 3 |
duct of male reproductive system | 2.80e-11 | 4 |
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
internal genitalia | 2.35e-07 | 25 |
kidney | 4.28e-07 | 26 |
kidney mesenchyme | 4.28e-07 | 26 |
upper urinary tract | 4.28e-07 | 26 |
kidney rudiment | 4.28e-07 | 26 |
kidney field | 4.28e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.11e-21 | 2 |
female reproductive endometrioid cancer | 6.78e-08 | 6 |
adenocarcinoma | 2.28e-07 | 25 |
female reproductive organ cancer | 6.82e-07 | 27 |