FFCP PHASE1:Hg19::chr9:101705760..101705771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1306 | |EntrezGene=1306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2192 | |HGNC=2192 | ||
|TSSclassifier=strong | |||
|UniProt=P39059 | |UniProt=P39059 | ||
|association_with_transcript=-149bp_to_ENST00000375001,ENST00000471477_5end | |association_with_transcript=-149bp_to_ENST00000375001,ENST00000471477_5end | ||
|cluster_id=chr9:101705760..101705771,+ | |||
|coexpression_cluster_id=C1547 | |||
|description=CAGE_peak_12_at_COL15A1_5end | |description=CAGE_peak_12_at_COL15A1_5end | ||
|id=chr9:101705760..101705771,+ | |id=chr9:101705760..101705771,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000487;1.26e-10;2!CL:0000138;8.11e-08;6!CL:0002622;3.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,2.04e-10,2;CL:0000058,7.14e-08,6;CL:0000138,7.14e-08,6;CL:0002622,3.76e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.28e-30!115;UBERON:0003101!1.92e-08!22;UBERON:0000079!1.92e-08!22;UBERON:0004122!7.60e-08!15;UBERON:0001046!4.13e-07!19 | |ontology_enrichment_uberon=UBERON:0007023!4.28e-30!115;UBERON:0003101!1.92e-08!22;UBERON:0000079!1.92e-08!22;UBERON:0004122!7.60e-08!15;UBERON:0001046!4.13e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.26e-10;2!UBERON:0003127;2.72e-10;2!UBERON:0003101;1.40e-09;22!UBERON:0000079;1.40e-09;22!UBERON:0001044;1.09e-07;6!UBERON:0003293;1.09e-07;6!UBERON:0003294;1.09e-07;6!UBERON:0010047;1.09e-07;6!UBERON:0003408;1.09e-07;6!UBERON:0000167;1.09e-07;6!UBERON:0003978;1.89e-07;3!UBERON:0000946;1.89e-07;3!UBERON:0002367;4.79e-07;11!UBERON:0010147;4.79e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.73e-11,2;UBERON:0003127,2.99e-10,2;UBERON:0003101,1.29e-09,22;UBERON:0000079,1.29e-09,22;UBERON:0001044,9.91e-08,6;UBERON:0003293,9.91e-08,6;UBERON:0003294,9.91e-08,6;UBERON:0010047,9.91e-08,6;UBERON:0000167,9.91e-08,6;UBERON:0004122,1.22e-07,15;UBERON:0003978,1.35e-07,3;UBERON:0009751,1.35e-07,3;UBERON:0000946,1.35e-07,3;UBERON:0002523,1.35e-07,3;UBERON:0005983,1.35e-07,3;UBERON:0002165,1.35e-07,3;UBERON:0002062,1.35e-07,3;UBERON:0007280,1.35e-07,3;UBERON:0000161,2.75e-07,36;UBERON:0002367,5.55e-07,11;UBERON:0010147,5.55e-07,11;UBERON:0009846,5.55e-07,11;UBERON:0003353,5.55e-07,11;UBERON:0004902,5.55e-07,11;UBERON:0003820,5.55e-07,11;UBERON:0009847,5.55e-07,11 | |||
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| ||
|short_description=p12@COL15A1 | |short_description=p12@COL15A1 | ||
}} | }} |
Latest revision as of 19:24, 19 September 2015
Short description: | p12@COL15A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_COL15A1_5end |
Coexpression cluster: | C1547_Olfactory_Chondrocyte_heart_diaphragm_tongue_mature_placenta |
Association with transcript: | -149bp_to_ENST00000375001, ENST00000471477_5end |
EntrezGene: | COL15A1 |
HGNC: | 2192 |
UniProt: | P39059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 2.04e-10 | 2 |
chondroblast | 7.14e-08 | 6 |
chondrocyte | 7.14e-08 | 6 |
prostate stromal cell | 3.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.73e-11 | 2 |
open tracheal system trachea | 2.99e-10 | 2 |
male organism | 1.29e-09 | 22 |
male reproductive system | 1.29e-09 | 22 |
saliva-secreting gland | 9.91e-08 | 6 |
gland of oral region | 9.91e-08 | 6 |
gland of foregut | 9.91e-08 | 6 |
oral gland | 9.91e-08 | 6 |
oral cavity | 9.91e-08 | 6 |
genitourinary system | 1.22e-07 | 15 |
valve | 1.35e-07 | 3 |
cardiac mesenchyme | 1.35e-07 | 3 |
cardial valve | 1.35e-07 | 3 |
tunica intima | 1.35e-07 | 3 |
heart layer | 1.35e-07 | 3 |
endocardium | 1.35e-07 | 3 |
endocardial cushion | 1.35e-07 | 3 |
presumptive endocardium | 1.35e-07 | 3 |
orifice | 2.75e-07 | 36 |
prostate gland | 5.55e-07 | 11 |
male accessory sex gland | 5.55e-07 | 11 |
embryonic cloacal epithelium | 5.55e-07 | 11 |
epithelium of hindgut | 5.55e-07 | 11 |
urogenital sinus epithelium | 5.55e-07 | 11 |
prostate bud | 5.55e-07 | 11 |
prostate field | 5.55e-07 | 11 |