FFCP PHASE1:Hg19::chr4:15938074..15938085,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=172bp_to_AB464521_5end | |association_with_transcript=172bp_to_AB464521_5end | ||
|cluster_id=chr4:15938074..15938085,- | |||
|coexpression_cluster_id=C4386 | |||
|description=CAGE_peak_3_at_AB464521_5end | |description=CAGE_peak_3_at_AB464521_5end | ||
|id=chr4:15938074..15938085,- | |id=chr4:15938074..15938085,- | ||
|ontology_enrichment_celltype=CL:0002076!3.14e-28!43;CL:0000223!5.21e-22!59;CL:0000066!5.92e-18!254;CL:0002621!8.01e-15!3;CL:0002202!1.99e-13!9;CL:0002632!1.99e-13!9;CL:0002251!2.87e-13!21;CL:0002159!2.89e-09!13;CL:0002368!3.32e-09!13;CL:0000076!1.41e-08!62;CL:0000240!5.16e-08!6;CL:0000311!5.16e-08!6;CL:0000079!5.16e-08!6;CL:0000237!5.16e-08!6;CL:0000036!5.16e-08!6;CL:0000357!5.16e-08!6;CL:0000114!5.16e-08!6;CL:0002328!1.53e-07!3;CL:0000068!1.58e-07!3;CL:0000069!1.58e-07!3;CL:0000307!1.58e-07!3;CL:0000377!1.58e-07!3;CL:0002166!2.72e-07!3;CL:0002231!2.80e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.14e-28!43;CL:0000223!5.21e-22!59;CL:0000066!5.92e-18!254;CL:0002621!8.01e-15!3;CL:0002202!1.99e-13!9;CL:0002632!1.99e-13!9;CL:0002251!2.87e-13!21;CL:0002159!2.89e-09!13;CL:0002368!3.32e-09!13;CL:0000076!1.41e-08!62;CL:0000240!5.16e-08!6;CL:0000311!5.16e-08!6;CL:0000079!5.16e-08!6;CL:0000237!5.16e-08!6;CL:0000036!5.16e-08!6;CL:0000357!5.16e-08!6;CL:0000114!5.16e-08!6;CL:0002328!1.53e-07!3;CL:0000068!1.58e-07!3;CL:0000069!1.58e-07!3;CL:0000307!1.58e-07!3;CL:0000377!1.58e-07!3;CL:0002166!2.72e-07!3;CL:0002231!2.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;7.88e-15;14!CL:0000317;2.74e-12;2!CL:1000448;2.74e-12;2!CL:0002308;2.74e-12;2!CL:0002140;2.74e-12;2!CL:0002202;8.36e-11;9!CL:0000362;8.36e-11;9!CL:0002632;8.36e-11;9!CL:0002328;9.31e-09;3!CL:0002166;1.26e-08;3!CL:0002231;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0002368;9.20e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,6.37e-15,14;CL:0000317,2.07e-12,2;CL:1000448,2.07e-12,2;CL:0002308,2.07e-12,2;CL:0002140,2.07e-12,2;CL:0000362,7.22e-11,9;CL:0002202,8.79e-11,9;CL:0002632,8.79e-11,9;CL:0002076,8.50e-09,42;CL:0002328,9.66e-09,3;CL:0002166,1.12e-08,3;CL:0000068,1.30e-08,3;CL:0000069,1.30e-08,3;CL:0000307,1.30e-08,3;CL:0000377,1.30e-08,3;CL:0002231,1.51e-08,3;CL:0002368,9.51e-08,13 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2!CL:0000377;1.26e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!1.68e-15!14;DOID:305!2.06e-11!106;DOID:0050687!2.09e-07!143 | |ontology_enrichment_disease=DOID:1749!1.68e-15!14;DOID:305!2.06e-11!106;DOID:0050687!2.09e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.72e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.85e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.09e-15!5;UBERON:0001949!8.01e-15!3;UBERON:0001004!3.22e-13!72;UBERON:0003343!2.22e-11!4;UBERON:0004785!2.22e-11!4;UBERON:0001007!9.24e-11!155;UBERON:0001555!9.24e-11!155;UBERON:0007026!9.24e-11!155;UBERON:0004119!1.50e-10!169;UBERON:0000925!1.50e-10!169;UBERON:0006595!1.50e-10!169;UBERON:0000166!2.72e-10!21;UBERON:0000344!8.92e-10!12;UBERON:0000165!9.40e-10!28;UBERON:0000930!9.40e-10!28;UBERON:0000161!1.69e-09!35;UBERON:0007196!1.59e-08!14;UBERON:0001558!1.59e-08!14;UBERON:0008947!1.66e-08!38;UBERON:0003258!1.66e-08!38;UBERON:0000072!1.88e-08!46;UBERON:0000974!9.50e-08!10;UBERON:0004815!1.53e-07!3;UBERON:0002031!1.53e-07!3;UBERON:0004807!2.06e-07!28;UBERON:0000065!4.25e-07!53 | |ontology_enrichment_uberon=UBERON:0003729!1.09e-15!5;UBERON:0001949!8.01e-15!3;UBERON:0001004!3.22e-13!72;UBERON:0003343!2.22e-11!4;UBERON:0004785!2.22e-11!4;UBERON:0001007!9.24e-11!155;UBERON:0001555!9.24e-11!155;UBERON:0007026!9.24e-11!155;UBERON:0004119!1.50e-10!169;UBERON:0000925!1.50e-10!169;UBERON:0006595!1.50e-10!169;UBERON:0000166!2.72e-10!21;UBERON:0000344!8.92e-10!12;UBERON:0000165!9.40e-10!28;UBERON:0000930!9.40e-10!28;UBERON:0000161!1.69e-09!35;UBERON:0007196!1.59e-08!14;UBERON:0001558!1.59e-08!14;UBERON:0008947!1.66e-08!38;UBERON:0003258!1.66e-08!38;UBERON:0000072!1.88e-08!46;UBERON:0000974!9.50e-08!10;UBERON:0004815!1.53e-07!3;UBERON:0002031!1.53e-07!3;UBERON:0004807!2.06e-07!28;UBERON:0000065!4.25e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.74e-12;2!UBERON:0007771;2.74e-12;2!UBERON:0003297;2.74e-12;2!UBERON:0001821;2.74e-12;2!UBERON:0003487;2.74e-12;2!UBERON:0001820;2.74e-12;2!UBERON:0004815;9.31e-09;3!UBERON:0002031;9.31e-09;3!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0003343;6.50e-07;4!UBERON:0004785;6.50e-07;4!UBERON:0001003;7.63e-07;15!UBERON:0007376;7.63e-07;15!UBERON:0007196;7.63e-07;15!UBERON:0001558;7.63e-07;15!UBERON:0001708;8.85e-07;4!UBERON:0008895;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.07e-12,2;UBERON:0007771,2.07e-12,2;UBERON:0003297,2.07e-12,2;UBERON:0001821,2.07e-12,2;UBERON:0003487,2.07e-12,2;UBERON:0001820,2.07e-12,2;UBERON:0005089,2.07e-12,2;UBERON:0005088,2.07e-12,2;UBERON:0004815,9.66e-09,3;UBERON:0002031,9.66e-09,3;UBERON:0001723,1.21e-08,3;UBERON:0001033,1.21e-08,3;UBERON:0010056,1.21e-08,3;UBERON:0003102,5.03e-08,99;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4;UBERON:0001003,6.99e-07,15;UBERON:0007376,6.99e-07,15;UBERON:0007383,6.99e-07,15;UBERON:0007196,7.86e-07,15;UBERON:0001558,7.86e-07,15;UBERON:0001708,8.14e-07,4;UBERON:0008895,8.14e-07,4 | |||
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|short_description=p3@AB464521 | |short_description=p3@AB464521 | ||
}} | }} |
Latest revision as of 02:47, 30 July 2015
Short description: | p3@AB464521 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB464521_5end |
Coexpression cluster: | C4386_Bronchial_Keratinocyte_Sebocyte_oral_tongue_Tracheal_Prostate |
Association with transcript: | 172bp_to_AB464521_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 6.37e-15 | 14 |
sebum secreting cell | 2.07e-12 | 2 |
epithelial cell of sweat gland | 2.07e-12 | 2 |
epithelial cell of skin gland | 2.07e-12 | 2 |
acinar cell of sebaceous gland | 2.07e-12 | 2 |
epidermal cell | 7.22e-11 | 9 |
epithelial cell of tracheobronchial tree | 8.79e-11 | 9 |
epithelial cell of lower respiratory tract | 8.79e-11 | 9 |
endo-epithelial cell | 8.50e-09 | 42 |
bronchial epithelial cell | 9.66e-09 | 3 |
epithelial cell of Malassez | 1.12e-08 | 3 |
duct epithelial cell | 1.30e-08 | 3 |
branched duct epithelial cell | 1.30e-08 | 3 |
tracheal epithelial cell | 1.30e-08 | 3 |
tracheoblast | 1.30e-08 | 3 |
epithelial cell of prostate | 1.51e-08 | 3 |
respiratory epithelial cell | 9.51e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.07e-12 | 2 |
epidermis gland | 2.07e-12 | 2 |
gland of integumental system | 2.07e-12 | 2 |
sebaceous gland | 2.07e-12 | 2 |
skin sebaceous gland | 2.07e-12 | 2 |
sweat gland | 2.07e-12 | 2 |
sweat gland placode | 2.07e-12 | 2 |
sebaceous gland placode | 2.07e-12 | 2 |
lower respiratory tract epithelium | 9.66e-09 | 3 |
epithelium of bronchus | 9.66e-09 | 3 |
tongue | 1.21e-08 | 3 |
gustatory system | 1.21e-08 | 3 |
future tongue | 1.21e-08 | 3 |
surface structure | 5.03e-08 | 99 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
skin epidermis | 6.99e-07 | 15 |
outer epithelium | 6.99e-07 | 15 |
enveloping layer of ectoderm | 6.99e-07 | 15 |
tracheobronchial tree | 7.86e-07 | 15 |
lower respiratory tract | 7.86e-07 | 15 |
jaw skeleton | 8.14e-07 | 4 |
splanchnocranium | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.85e-07 | 14 |