FFCP PHASE1:Hg19::chr5:126113018..126113036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_ENST00000463908_5end | |association_with_transcript=-34bp_to_ENST00000463908_5end | ||
|cluster_id=chr5:126113018..126113036,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_5_at_LMNB1_5end | |description=CAGE_peak_5_at_LMNB1_5end | ||
|id=chr5:126113018..126113036,+ | |id=chr5:126113018..126113036,+ | ||
|ontology_enrichment_celltype=CL:0002319!6.13e-08!25 | |ontology_enrichment_celltype=CL:0002319!6.13e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000540;7.57e-12;6!CL:0000404;7.57e-12;6!CL:0000123;2.96e-09;2!CL:0000242;2.96e-09;2!CL:0000182;1.03e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-12,6;CL:0000031,6.36e-12,6;CL:0000404,6.36e-12,6;CL:0000242,1.39e-09,2;CL:0000047,5.93e-09,8;CL:0000182,1.11e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000031;7.57e-12;6 | |||
|ontology_enrichment_disease=DOID:162!7.42e-24!235;DOID:14566!3.77e-23!239;DOID:0050687!4.34e-17!143;DOID:305!3.54e-16!106;DOID:0050686!1.06e-09!137;DOID:2531!1.59e-08!51;DOID:0060083!1.59e-08!51;DOID:1240!3.39e-07!39 | |ontology_enrichment_disease=DOID:162!7.42e-24!235;DOID:14566!3.77e-23!239;DOID:0050687!4.34e-17!143;DOID:305!3.54e-16!106;DOID:0050686!1.06e-09!137;DOID:2531!1.59e-08!51;DOID:0060083!1.59e-08!51;DOID:1240!3.39e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.24e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.93e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.10e-07!9;UBERON:0001557!1.43e-07!19 | |ontology_enrichment_uberon=UBERON:0001737!1.10e-07!9;UBERON:0001557!1.43e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.61e-07;9!UBERON:0001557;1.61e-07;9!UBERON:0002107;1.73e-07;19!UBERON:0006925;1.73e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.74e-07,19;UBERON:0006925,1.74e-07,19;UBERON:0008836,1.74e-07,19;UBERON:0001737,2.51e-07,9 | |||
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| ||
|short_description=p5@LMNB1 | |short_description=p5@LMNB1 | ||
}} | }} |
Latest revision as of 01:38, 20 September 2015
Short description: | p5@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LMNB1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -34bp_to_ENST00000463908_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.36e-12 | 6 |
neuroblast | 6.36e-12 | 6 |
electrically signaling cell | 6.36e-12 | 6 |
Merkel cell | 1.39e-09 | 2 |
neuronal stem cell | 5.93e-09 | 8 |
hepatocyte | 1.11e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.74e-07 | 19 |
digestive gland | 1.74e-07 | 19 |
liver bud | 1.74e-07 | 19 |
larynx | 2.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.93e-10 | 2 |