FFCP PHASE1:Hg19::chr5:180674094..180674122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=193bp_to_ENST00000505151_5end | |association_with_transcript=193bp_to_ENST00000505151_5end | ||
|cluster_id=chr5:180674094..180674122,+ | |||
|description=CAGE_peak_1_at_ENST00000505151_5end | |description=CAGE_peak_1_at_ENST00000505151_5end | ||
|id=chr5:180674094..180674122,+ | |id=chr5:180674094..180674122,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.75e-24!254;CL:0000548!3.88e-11!679;CL:0000004!3.88e-11!679;CL:0000255!3.88e-11!679;CL:0002321!4.27e-11!248;CL:0000012!5.73e-11!682;CL:0000220!8.29e-11!246 | |ontology_enrichment_celltype=CL:0000066!8.75e-24!254;CL:0000548!3.88e-11!679;CL:0000004!3.88e-11!679;CL:0000255!3.88e-11!679;CL:0002321!4.27e-11!248;CL:0000012!5.73e-11!682;CL:0000220!8.29e-11!246 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.62e-07;15!CL:0002681;2.26e-07;12!CL:0002584;2.26e-07;12!CL:0000239;2.99e-07;3!CL:1000615;2.99e-07;3!CL:0002306;2.99e-07;3!CL:1000507;4.56e-07;10!CL:1000494;4.56e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.47e-10,253;CL:1000449,1.26e-07,15;CL:0000239,1.70e-07,3;CL:1000615,1.70e-07,3;CL:0002306,1.70e-07,3;CL:0002681,1.80e-07,12;CL:0002584,1.80e-07,12;CL:1000507,2.33e-07,10;CL:1000494,2.33e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.09e-13!106;DOID:14566!7.06e-10!239;DOID:0050687!3.45e-09!143;DOID:162!7.65e-09!235 | |ontology_enrichment_disease=DOID:305!1.09e-13!106;DOID:14566!7.06e-10!239;DOID:0050687!3.45e-09!143;DOID:162!7.65e-09!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.21e-09!216;UBERON:0003104!2.31e-09!238;UBERON:0009142!2.31e-09!238;UBERON:0005256!1.41e-07!143;UBERON:0000058!6.89e-07!26;UBERON:0009569!7.31e-07!113;UBERON:0006555!7.32e-07!17;UBERON:0005103!7.32e-07!17;UBERON:0000083!7.32e-07!17;UBERON:0009201!7.32e-07!17;UBERON:0004819!7.32e-07!17;UBERON:0006553!7.32e-07!17;UBERON:0003074!7.32e-07!17;UBERON:0003060!7.32e-07!17;UBERON:0004119!7.50e-07!169;UBERON:0000925!7.50e-07!169;UBERON:0006595!7.50e-07!169 | |ontology_enrichment_uberon=UBERON:0002100!1.21e-09!216;UBERON:0003104!2.31e-09!238;UBERON:0009142!2.31e-09!238;UBERON:0005256!1.41e-07!143;UBERON:0000058!6.89e-07!26;UBERON:0009569!7.31e-07!113;UBERON:0006555!7.32e-07!17;UBERON:0005103!7.32e-07!17;UBERON:0000083!7.32e-07!17;UBERON:0009201!7.32e-07!17;UBERON:0004819!7.32e-07!17;UBERON:0006553!7.32e-07!17;UBERON:0003074!7.32e-07!17;UBERON:0003060!7.32e-07!17;UBERON:0004119!7.50e-07!169;UBERON:0000925!7.50e-07!169;UBERON:0006595!7.50e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.62e-07;15!UBERON:0004819;1.62e-07;15!UBERON:0001285;1.62e-07;15!UBERON:0007684;1.62e-07;15!UBERON:0001225;2.26e-07;12!UBERON:0008987;2.26e-07;12!UBERON:0001851;2.62e-07;15!UBERON:0006853;2.99e-07;3!UBERON:0007685;2.99e-07;3!UBERON:0004134;2.99e-07;3!UBERON:0004211;4.56e-07;10!UBERON:0009773;4.56e-07;10!UBERON:0001231;4.56e-07;10!UBERON:0004810;4.56e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,1.08e-08,16;UBERON:0004819,1.08e-08,16;UBERON:0004211,1.26e-07,15;UBERON:0009773,1.26e-07,15;UBERON:0001231,1.26e-07,15;UBERON:0001285,1.26e-07,15;UBERON:0007684,1.26e-07,15;UBERON:0004208,1.26e-07,15;UBERON:0006853,1.70e-07,3;UBERON:0007685,1.70e-07,3;UBERON:0004134,1.70e-07,3;UBERON:0001225,1.80e-07,12;UBERON:0008987,1.80e-07,12;UBERON:0001851,2.17e-07,15;UBERON:0004810,2.33e-07,10 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,0,0,0,0,0.631719873426831,0.261185628199839,0.982935746006035,0.697801167972428,0.873765488520689,0.527533956456907,0.618831764800233,0.331397375727916,0,0,0.730310090387373,0.975865597581014,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0.376627918784408,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,1.50602959389125,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0.886917589850256,0.790513071238134,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,0,0.825354125820202,0.417989933073621,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,0.81014194788176,0.892997282840798,1.34717623575702,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.25326102332916,1.32409180813219,0.860509862246441,0,1.12135520028461,2.1349799145941,0.24666754841716,0.311211035399766,0.942974704487816,1.30769522490767,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.704606991862589,0.809364721840658,1.12360645361799,0.408308342509787,0.859840221182376,0.309977343527296,0,0,0.910161361938026,0,0.841680569770331,0.750711119231785,0,1.31693286264251,0.30648779579902,0.300476117813194,0.680593098960126,0.717558542755448,0.213557388818567,0,1.20036438433761,0.103052529238439,0.515281080091258,0,0.506328996723799,0.0974370051611986,0.504867548488229,0,0.161646056818812,1.42003837006646,0.10075209822764,0.169560592310488,1.15956511897978,1.09098448236334,1.14721838155602,0.609868530647977,0.397589304964456,0,0,0,1.09493207722749,0,0.643240938192885,0,0,0,0.828147600278907,0.842923450390509,1.20505514941741,0.772057809126758,0.217879444092406,0.71181185733329,1.34831308160164,0.588664395376038,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0.686271241194102,0.658501712451753,0,0.100528972411631,0.370353780634118,0,1.03993478527958,1.44331342025273,0.115930404975077,0.117408694235822,0.577465791044295,0,0.190254152234598,1.58040879591855,1.71697232418975,0,0,0,0.93733833986777,3.19166043577833,1.70130116690864,0.358234090811393,0,0,0,0,0.414656231081544,0,0.37872730027914,0.063497894292169,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0.571652865261156,0.784917590417525,0.43596006883328,0.4400297149257,0.129271715757778,0,0,1.32969058292435,1.04007436911366,1.54324424557285,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0,0.355391948742546,1.58390374586686,0.602878754119172,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0.128343036279748,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,1.03985430765404,0.713715955188647,1.10391690523754,0.937131319941706,0.601892199455438,0,0,0,0.184369168541703,0.434418072340414,0.587403472388222,0,0,0,0,0.909382714338778,1.66435439510497,0,0.248107807818777,0.767309866440312,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0.532685175939381,0.492762936082855,1.03850885836724,0.348631135379878,0.362578348774867,0.601519410909855,0.184161977871793,0.114814448164607,0.182091168006717,0.393373244878272,0.902399225814824,0.847168708148562,0.784349769176855,2.92278449306521,0.73886140225013,1.13733384070897,1.19065593693561,0.647747748306418,0,1.35473218771926,1.50506932156456,2.29388645740534,2.49322802678617,1.56712328305525,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.330037999682352,0,0.650060246036521,0,0.096670718292122,0.462145851343933,1.22802939780904,0.964856007391714,0.644521469209642,0.290033387828457,0.596586391912706,0,0.826424576804891,1.15314040419064,1.53135254993501,0.30347334256665,0,0,0.6970372701606,0,0,1.73986598415015,0.37064843820784,0.143124886741991,0,0.316379424718726,0.38126038784765,0.511795582622668,0,0.318203247925937,0,1.07923474549989,1.09814811894422,0.353437207037059,0.606547444719948,0,1.26377536871694,0.48763373908959,0.731140468893853,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0.608731130888112,0,0.281695602532241,0.286822704408103,0.196498082026242,0,0.354761064070598,0.422215270595328,0,1.51789269506286,0.699869440489966,0.577332676353072,1.34060455107157,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0.399158742865633,0,0,0,0,0,0.47003968731907,0,0.169291777801603,0,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0.540911356951966,0,0,0.1871405404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| ||
|short_description=p1@ENST00000505151 | |short_description=p1@ENST00000505151 | ||
}} | }} |
Latest revision as of 14:06, 30 July 2015
Short description: | p1@ENST00000505151 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000505151_5end |
Coexpression cluster: | NA |
Association with transcript: | 193bp_to_ENST00000505151_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.47e-10 | 253 |
epithelial cell of nephron | 1.26e-07 | 15 |
brush border epithelial cell | 1.70e-07 | 3 |
kidney cortex tubule cell | 1.70e-07 | 3 |
epithelial cell of proximal tubule | 1.70e-07 | 3 |
kidney cortical cell | 1.80e-07 | 12 |
renal cortical epithelial cell | 1.80e-07 | 12 |
kidney tubule cell | 2.33e-07 | 10 |
nephron tubule epithelial cell | 2.33e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 1.08e-08 | 16 |
kidney epithelium | 1.08e-08 | 16 |
nephron epithelium | 1.26e-07 | 15 |
renal tubule | 1.26e-07 | 15 |
nephron tubule | 1.26e-07 | 15 |
nephron | 1.26e-07 | 15 |
uriniferous tubule | 1.26e-07 | 15 |
nephrogenic mesenchyme | 1.26e-07 | 15 |
renal cortex tubule | 1.70e-07 | 3 |
region of nephron tubule | 1.70e-07 | 3 |
proximal tubule | 1.70e-07 | 3 |
cortex of kidney | 1.80e-07 | 12 |
renal parenchyma | 1.80e-07 | 12 |
cortex | 2.17e-07 | 15 |
nephron tubule epithelium | 2.33e-07 | 10 |