FFCP PHASE1:Hg19::chr5:34008113..34008124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23600 | |EntrezGene=23600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=451 | |HGNC=451 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000382068,ENST00000512079_5end | |association_with_transcript=8bp_to_ENST00000382068,ENST00000512079_5end | ||
|cluster_id=chr5:34008113..34008124,- | |||
|description=CAGE_peak_3_at_AMACR_5end | |description=CAGE_peak_3_at_AMACR_5end | ||
|id=chr5:34008113..34008124,- | |id=chr5:34008113..34008124,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.84e-09;3!CL:0002563;2.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.26e-09,3;CL:0002563,2.18e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.57e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;6.57e-08;1!DOID:1357;6.57e-08;1!DOID:3151;1.79e-07;1!DOID:3149;1.79e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.96e-08,1;DOID:1357,5.96e-08,1;DOID:3151,1.69e-07,1;DOID:3149,1.69e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.82e-10;6!UBERON:0003293;3.82e-10;6!UBERON:0003294;3.82e-10;6!UBERON:0010047;3.82e-10;6!UBERON:0003408;3.82e-10;6!UBERON:0000167;3.82e-10;6!UBERON:0001831;6.57e-08;1!UBERON:0001764;6.57e-08;1!UBERON:0001825;6.57e-08;1!UBERON:0001567;6.57e-08;1!UBERON:0001242;2.63e-07;4!UBERON:0001262;2.63e-07;4!UBERON:0004786;2.63e-07;4!UBERON:0004808;2.63e-07;4!UBERON:0001277;2.63e-07;4!UBERON:0002365;7.62e-07;31!UBERON:0002330;7.62e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.48e-10,6;UBERON:0003293,3.48e-10,6;UBERON:0003294,3.48e-10,6;UBERON:0010047,3.48e-10,6;UBERON:0000167,3.48e-10,6;UBERON:0001764,5.96e-08,1;UBERON:0001825,5.96e-08,1;UBERON:0001831,6.80e-08,1;UBERON:0001567,6.80e-08,1;UBERON:0008801,6.80e-08,1;UBERON:0004921,1.58e-07,118;UBERON:0001242,2.18e-07,4;UBERON:0001262,2.18e-07,4;UBERON:0004786,2.18e-07,4;UBERON:0004808,2.18e-07,4;UBERON:0001277,2.18e-07,4;UBERON:0002365,9.07e-07,31;UBERON:0002330,9.07e-07,31 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.314843125254717,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0.671746422719773,0.647787332037959,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.403213486449465,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,3.66741411393595,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0.66944122552934,0.402829317109147,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0.993943903390637,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0.103052529238439,0.515281080091258,0,0.337552664482532,0.292311015483596,0.252433774244115,0.368199594569197,0,0,0,0.339121184620975,0.386521706326594,0.272746120590835,0.573609190778008,0.121973706129595,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0.55146986366197,0.217879444092406,0,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,0,1.18157981336281,0,1.59884970106048,0,0.548751427043128,1.1240175325762,0.201057944823262,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0.468008530278475,0.148631162288728,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0.621984346622316,0.432359860250884,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,1.65766205374414,0,0.500170521059677,0.271265023699736,0,0.892144943985809,0,0.234282829985426,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0.992431231275107,0.460385919864187,0,0.256278298511402,0,0.64341568457443,0,0.462629081407967,0,0.164254312027618,0,0,1.0877350463246,1.80455823272956,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,1.44257416306811,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0.616067160352178,0,0,0.37064843820784,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0.842516912477962,0.48763373908959,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0.329294892959902,0,0.349934720244983,0.192444225451024,0,1.08890984861323,1.03558180854457,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,1.0077309914171,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0,0.886642856860642,0,0.435753854075961,0,0.0769502585037971,0.227884111694002,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0,1.68798451622422,0,4.24059214301822,0,0,0,1.22206028986725,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.870592065804026,0,0.171986032471617,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0.451961481561065,0.137041924646751,0,0.0633107959558787,0,0,0.85381197895741,0,0.144090417154106,0.114536596165916,9.43772488240805,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0.236349546921671,0.247247575143499,0.337017719270924,0.0984274815147488,0.169346664131569,0,0.136203406111576,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.0607495566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| ||
|short_description=p3@AMACR | |short_description=p3@AMACR | ||
}} | }} |
Latest revision as of 17:12, 17 September 2015
Short description: | p3@AMACR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AMACR_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000382068, ENST00000512079_5end |
EntrezGene: | AMACR |
HGNC: | 451 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.26e-09 | 3 |
intestinal epithelial cell | 2.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.48e-10 | 6 |
gland of oral region | 3.48e-10 | 6 |
gland of foregut | 3.48e-10 | 6 |
oral gland | 3.48e-10 | 6 |
oral cavity | 3.48e-10 | 6 |
maxillary sinus | 5.96e-08 | 1 |
paranasal sinus | 5.96e-08 | 1 |
parotid gland | 6.80e-08 | 1 |
cheek | 6.80e-08 | 1 |
parotid gland primordium | 6.80e-08 | 1 |
subdivision of digestive tract | 1.58e-07 | 118 |
intestinal mucosa | 2.18e-07 | 4 |
wall of intestine | 2.18e-07 | 4 |
gastrointestinal system mucosa | 2.18e-07 | 4 |
gastrointestinal system epithelium | 2.18e-07 | 4 |
intestinal epithelium | 2.18e-07 | 4 |
exocrine gland | 9.07e-07 | 31 |
exocrine system | 9.07e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.96e-08 | 1 |
maxillary sinus cancer | 5.96e-08 | 1 |
skin squamous cell carcinoma | 1.69e-07 | 1 |
keratoacanthoma | 1.69e-07 | 1 |