FFCP PHASE1:Hg19::chr16:4292071..4292088,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:4292071..4292088,-
|short_description=p1@SRL
|description=CAGE_peak_1_at_SRL_5end
|association_with_transcript=0bp_to_ENST00000330063,ENST00000399609,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6345 | |EntrezGene=6345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11295 | |HGNC=11295 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TD4,B3KPP4 | |UniProt=Q86TD4,B3KPP4 | ||
|association_with_transcript=0bp_to_ENST00000330063,ENST00000399609,NM_001098814,uc002cvy.3,uc002cvz.3_5end | |||
|cluster_id=chr16:4292071..4292088,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_SRL_5end | |||
|id=chr16:4292071..4292088,- | |||
|ontology_enrichment_celltype=CL:0000188!2.83e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;5.84e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.06e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.35e-08;65!UBERON:0003104;9.52e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.30e-62!115;UBERON:0001049!4.97e-17!57;UBERON:0005068!4.97e-17!57;UBERON:0006241!4.97e-17!57;UBERON:0007135!4.97e-17!57;UBERON:0003075!4.76e-14!86;UBERON:0007284!4.76e-14!86;UBERON:0002346!6.72e-13!90;UBERON:0002616!7.18e-13!59;UBERON:0002780!1.21e-11!41;UBERON:0001890!1.21e-11!41;UBERON:0006240!1.21e-11!41;UBERON:0003080!3.30e-11!42;UBERON:0001017!4.96e-11!82;UBERON:0005743!7.86e-11!86;UBERON:0001893!2.50e-10!34;UBERON:0000955!2.79e-10!69;UBERON:0006238!2.79e-10!69;UBERON:0001869!3.65e-10!32;UBERON:0002020!3.66e-10!34;UBERON:0003528!3.66e-10!34;UBERON:0000481!3.86e-10!347;UBERON:0000073!1.27e-09!94;UBERON:0001016!1.27e-09!94;UBERON:0002791!1.39e-09!33;UBERON:0002619!2.58e-09!22;UBERON:0000153!4.59e-09!129;UBERON:0007811!4.59e-09!129;UBERON:0000483!8.78e-09!309;UBERON:0000119!1.68e-08!312;UBERON:0004111!3.44e-08!241;UBERON:0001950!5.50e-08!20;UBERON:0000956!8.95e-08!25;UBERON:0000203!8.95e-08!25;UBERON:0000477!1.18e-07!286;UBERON:0004121!1.57e-07!169;UBERON:0000033!1.75e-07!123;UBERON:0003076!2.24e-07!15;UBERON:0003057!2.24e-07!15;UBERON:0003056!4.20e-07!61;UBERON:0000924!4.53e-07!173;UBERON:0006601!4.53e-07!173;UBERON:0000025!7.31e-07!194;UBERON:0000922!8.86e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.03e-16;16!UBERON:0002036;2.03e-16;16!UBERON:0007023;7.61e-10;114!UBERON:0002385;1.86e-08;31!UBERON:0001015;1.86e-08;31!UBERON:0000383;1.86e-08;31!UBERON:0004151;1.90e-08;3!UBERON:0003978;2.60e-08;3!UBERON:0000946;2.60e-08;3!UBERON:0006947;1.76e-07;3!UBERON:0004054;1.76e-07;3!UBERON:0003135;7.62e-07;11!UBERON:0007100;9.30e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.33e-36,114;UBERON:0003103,5.51e-10,68;UBERON:0004151,1.90e-08,3;UBERON:0003978,2.61e-08,3;UBERON:0009751,2.61e-08,3;UBERON:0000946,2.61e-08,3;UBERON:0002523,2.61e-08,3;UBERON:0005983,2.61e-08,3;UBERON:0002165,2.61e-08,3;UBERON:0002062,2.61e-08,3;UBERON:0007280,2.61e-08,3;UBERON:0006947,1.97e-07,3;UBERON:0004054,1.97e-07,3;UBERON:0003135,8.30e-07,11 | |||
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| ||
|short_description=p1@SRL | |||
}} | }} |
Latest revision as of 15:54, 16 September 2015
Short description: | p1@SRL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRL_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000330063, ENST00000399609, NM_001098814, uc002cvy.3, uc002cvz.3_5end |
EntrezGene: | SRL |
HGNC: | 11295 |
UniProt: | Q86TD4B3KPP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.06e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.33e-36 | 114 |
compound organ | 5.51e-10 | 68 |
cardiac chamber | 1.90e-08 | 3 |
valve | 2.61e-08 | 3 |
cardiac mesenchyme | 2.61e-08 | 3 |
cardial valve | 2.61e-08 | 3 |
tunica intima | 2.61e-08 | 3 |
heart layer | 2.61e-08 | 3 |
endocardium | 2.61e-08 | 3 |
endocardial cushion | 2.61e-08 | 3 |
presumptive endocardium | 2.61e-08 | 3 |
male genital duct | 1.97e-07 | 3 |
internal male genitalia | 1.97e-07 | 3 |
male reproductive organ | 8.30e-07 | 11 |