FFCP PHASE1:Hg19::chr6:29892697..29892700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:29892697..29892700,+ | |||
|description=CAGE_peak_at_chr6:29892697..29892700,+ | |description=CAGE_peak_at_chr6:29892697..29892700,+ | ||
|id=chr6:29892697..29892700,+ | |id=chr6:29892697..29892700,+ | ||
|ontology_enrichment_celltype=CL:0000244!1.54e-12!4;CL:0000731!1.54e-12!4;CL:0002231!5.73e-08!3;CL:0000349!6.35e-08!3;CL:0002577!6.35e-08!3;CL:0002541!1.13e-07!3;CL:0000066!4.61e-07!254 | |ontology_enrichment_celltype=CL:0000244!1.54e-12!4;CL:0000731!1.54e-12!4;CL:0002231!5.73e-08!3;CL:0000349!6.35e-08!3;CL:0002577!6.35e-08!3;CL:0002541!1.13e-07!3;CL:0000066!4.61e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.66e-21;2!CL:0002231;1.60e-14;3!CL:0000244;3.10e-11;4!CL:0000731;3.10e-11;4!CL:0002537;2.97e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.70e-21,2;CL:0002231,2.09e-14,3;CL:0000244,2.53e-11,4;CL:0000731,2.53e-11,4;CL:0002537,2.74e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!5.83e-11!2 | |ontology_enrichment_disease=DOID:4929!5.83e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:4362;2.97e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.22e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003124!5.90e-12!7;UBERON:0004119!1.47e-10!169;UBERON:0000925!1.47e-10!169;UBERON:0006595!1.47e-10!169;UBERON:0000365!4.02e-10!5;UBERON:0005911!3.89e-09!82;UBERON:0005631!4.24e-09!14;UBERON:0000158!4.24e-09!14;UBERON:0005910!1.66e-08!6;UBERON:0000476!1.13e-07!3;UBERON:0000920!1.13e-07!3;UBERON:0002294!7.63e-07!7;UBERON:0001173!7.63e-07!7;UBERON:0004912!7.63e-07!7 | |ontology_enrichment_uberon=UBERON:0003124!5.90e-12!7;UBERON:0004119!1.47e-10!169;UBERON:0000925!1.47e-10!169;UBERON:0006595!1.47e-10!169;UBERON:0000365!4.02e-10!5;UBERON:0005911!3.89e-09!82;UBERON:0005631!4.24e-09!14;UBERON:0000158!4.24e-09!14;UBERON:0005910!1.66e-08!6;UBERON:0000476!1.13e-07!3;UBERON:0000920!1.13e-07!3;UBERON:0002294!7.63e-07!7;UBERON:0001173!7.63e-07!7;UBERON:0004912!7.63e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.66e-21;2!UBERON:0004801;4.66e-21;2!UBERON:0000365;2.97e-09;5!UBERON:0000002;6.33e-08;6!UBERON:0005910;6.33e-08;6!UBERON:0001560;6.33e-08;6!UBERON:0000305;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.70e-21,2;UBERON:0004801,5.70e-21,2;UBERON:0000365,2.53e-09,5;UBERON:0005910,5.54e-08,6;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6;UBERON:0000305,5.38e-07,7 | |||
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|short_description=p@chr6:29892697..29892700,+ | |short_description=p@chr6:29892697..29892700,+ | ||
}} | }} |
Latest revision as of 23:26, 30 July 2015
Short description: | p@chr6:29892697..29892700, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:29892697..29892700, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.70e-21 | 2 |
epithelial cell of prostate | 2.09e-14 | 3 |
transitional epithelial cell | 2.53e-11 | 4 |
urothelial cell | 2.53e-11 | 4 |
amnion mesenchymal stem cell | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.70e-21 | 2 |
cervix epithelium | 5.70e-21 | 2 |
urothelium | 2.53e-09 | 5 |
transitional epithelium | 5.54e-08 | 6 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
amnion | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.22e-09 | 5 |