FFCP PHASE1:Hg19::chr7:106264498..106264512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:106264498..106264512,+ | |||
|coexpression_cluster_id=C4639 | |||
|description=CAGE_peak_at_chr7:106264498..106264512,+ | |description=CAGE_peak_at_chr7:106264498..106264512,+ | ||
|id=chr7:106264498..106264512,+ | |id=chr7:106264498..106264512,+ | ||
|ontology_enrichment_celltype=CL:0002620!4.61e-29!23;CL:0000057!2.02e-19!75;CL:0000136!2.64e-11!15;CL:0002615!6.14e-10!3;CL:0002580!6.32e-10!3;CL:0002579!1.47e-09!3;CL:0000055!2.17e-09!180;CL:0000197!1.17e-08!6;CL:0000098!1.17e-08!6;CL:0002167!1.17e-08!6;CL:0002334!1.75e-08!12;CL:0002617!5.67e-07!2 | |ontology_enrichment_celltype=CL:0002620!4.61e-29!23;CL:0000057!2.02e-19!75;CL:0000136!2.64e-11!15;CL:0002615!6.14e-10!3;CL:0002580!6.32e-10!3;CL:0002579!1.47e-09!3;CL:0000055!2.17e-09!180;CL:0000197!1.17e-08!6;CL:0000098!1.17e-08!6;CL:0002167!1.17e-08!6;CL:0002334!1.75e-08!12;CL:0002617!5.67e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.91e-31;23!CL:0002580;2.74e-19;3!CL:0000197;1.19e-17;6!CL:0000098;1.19e-17;6!CL:0002167;1.19e-17;6!CL:0002617;3.07e-13;2!CL:0002334;6.43e-13;12!CL:0002615;1.08e-09;3!CL:0002579;2.01e-09;3!CL:0000057;8.87e-09;73!CL:0000136;5.72e-08;13!CL:0000222;8.83e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.90e-31,23;CL:0000057,2.14e-20,76;CL:0002580,1.66e-19,3;CL:0000197,1.58e-17,6;CL:0000098,1.58e-17,6;CL:0002167,1.58e-17,6;CL:0002617,3.48e-13,2;CL:0002334,6.21e-13,12;CL:0002615,1.09e-09,3;CL:0002579,2.64e-09,3;CL:0000136,6.67e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.44e-15!5;DOID:450!9.44e-15!5;DOID:66!9.44e-15!5;DOID:423!9.44e-15!5;DOID:0080000!9.44e-15!5;DOID:11722!9.44e-15!5 | |ontology_enrichment_disease=DOID:17!9.44e-15!5;DOID:450!9.44e-15!5;DOID:66!9.44e-15!5;DOID:423!9.44e-15!5;DOID:0080000!9.44e-15!5;DOID:11722!9.44e-15!5 | ||
|ontology_enrichment_disease_v019=DOID:17;4.60e-20;5!DOID:450;4.60e-20;5!DOID:66;4.60e-20;5!DOID:423;4.60e-20;5!DOID:0080000;4.60e-20;5!DOID:11722;4.60e-20;5!DOID:2513;6.36e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.50e-20,5;DOID:450,4.50e-20,5;DOID:66,4.50e-20,5;DOID:423,4.50e-20,5;DOID:0080000,4.50e-20,5;DOID:11722,4.50e-20,5;DOID:2513,6.80e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.64e-19!40;UBERON:0003688!8.75e-18!6;UBERON:0002358!8.75e-18!6;UBERON:0003684!8.75e-18!6;UBERON:0001178!8.75e-18!6;UBERON:0003102!1.67e-17!95;UBERON:0002199!1.27e-16!45;UBERON:0002416!1.27e-16!45;UBERON:0004457!1.73e-08!12;UBERON:0000042!1.73e-08!12;UBERON:0002367!2.86e-08!11;UBERON:0010147!2.86e-08!11;UBERON:0009846!2.86e-08!11;UBERON:0003353!2.86e-08!11;UBERON:0004902!2.86e-08!11;UBERON:0003820!2.86e-08!11;UBERON:0009847!2.86e-08!11;UBERON:0003937!1.59e-07!12;UBERON:0005399!1.59e-07!12;UBERON:0000310!2.19e-07!10;UBERON:0000475!3.04e-07!365;UBERON:0002384!8.79e-07!375 | |ontology_enrichment_uberon=UBERON:0002097!2.64e-19!40;UBERON:0003688!8.75e-18!6;UBERON:0002358!8.75e-18!6;UBERON:0003684!8.75e-18!6;UBERON:0001178!8.75e-18!6;UBERON:0003102!1.67e-17!95;UBERON:0002199!1.27e-16!45;UBERON:0002416!1.27e-16!45;UBERON:0004457!1.73e-08!12;UBERON:0000042!1.73e-08!12;UBERON:0002367!2.86e-08!11;UBERON:0010147!2.86e-08!11;UBERON:0009846!2.86e-08!11;UBERON:0003353!2.86e-08!11;UBERON:0004902!2.86e-08!11;UBERON:0003820!2.86e-08!11;UBERON:0009847!2.86e-08!11;UBERON:0003937!1.59e-07!12;UBERON:0005399!1.59e-07!12;UBERON:0000310!2.19e-07!10;UBERON:0000475!3.04e-07!365;UBERON:0002384!8.79e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.07e-17;6!UBERON:0002358;2.07e-17;6!UBERON:0003684;2.07e-17;6!UBERON:0001178;2.07e-17;6!UBERON:0002097;1.50e-15;41!UBERON:0000310;2.57e-15;10!UBERON:0001443;6.55e-14;11!UBERON:0002199;2.30e-12;46!UBERON:0002416;2.30e-12;46!UBERON:0004457;1.17e-11;9!UBERON:0000042;1.17e-11;9!UBERON:0003102;3.36e-09;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.71e-20,41;UBERON:0002199,1.73e-17,46;UBERON:0002416,1.73e-17,46;UBERON:0003688,2.73e-17,6;UBERON:0002358,2.73e-17,6;UBERON:0003684,2.73e-17,6;UBERON:0001178,2.73e-17,6;UBERON:0000310,2.14e-15,10;UBERON:0001443,5.56e-14,11;UBERON:0003102,3.04e-11,99;UBERON:0004457,1.03e-08,12;UBERON:0000042,1.03e-08,12 | |||
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|phase1_expression=1.45342703416445,1.2846031433459,2.25527046553554,4.00293193412522,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0,0,0,0,0,0,1.83892677479412,0.300476117813194,0,1.4351170855109,1.92201649936711,2.11931901159562,0.300091096084402,1.13357782162283,1.28820270022815,2.97786970130544,0.168776332241266,0.389748020644795,5.04867548488229,3.86609574297657,0.646584227275248,1.42003837006646,1.71278566986988,3.39121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5579603071565,11.7763132606127,3.6271555457805,1.05427273493442,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,1.48864684691266,2.14846762603287,1.68396056659844,1.28139149255701,3.07024349440022,0.482561763430822,0,0,0,0,0,0,0,0,0,1.26295892981067,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63799893689583,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,1.46552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,2.52369796457302,0,0,0,1.36023555307363,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:106264498..106264512,+ | |short_description=p@chr7:106264498..106264512,+ | ||
}} | }} |
Latest revision as of 04:48, 31 July 2015
Short description: | p@chr7:106264498..106264512, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:106264498..106264512, + |
Coexpression cluster: | C4639_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_Neurons_mesodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.90e-31 | 23 |
fibroblast | 2.14e-20 | 76 |
preadipocyte of the breast | 1.66e-19 | 3 |
receptor cell | 1.58e-17 | 6 |
sensory epithelial cell | 1.58e-17 | 6 |
olfactory epithelial cell | 1.58e-17 | 6 |
adipocyte of breast | 3.48e-13 | 2 |
preadipocyte | 6.21e-13 | 12 |
adipocyte of omentum tissue | 1.09e-09 | 3 |
omentum preadipocyte | 2.64e-09 | 3 |
fat cell | 6.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.71e-20 | 41 |
integument | 1.73e-17 | 46 |
integumental system | 1.73e-17 | 46 |
omentum | 2.73e-17 | 6 |
peritoneum | 2.73e-17 | 6 |
abdominal cavity | 2.73e-17 | 6 |
visceral peritoneum | 2.73e-17 | 6 |
breast | 2.14e-15 | 10 |
chest | 5.56e-14 | 11 |
surface structure | 3.04e-11 | 99 |
cavity lining | 1.03e-08 | 12 |
serous membrane | 1.03e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.50e-20 | 5 |
myotonic disease | 4.50e-20 | 5 |
muscle tissue disease | 4.50e-20 | 5 |
myopathy | 4.50e-20 | 5 |
muscular disease | 4.50e-20 | 5 |
myotonic dystrophy | 4.50e-20 | 5 |
basal cell carcinoma | 6.80e-08 | 1 |