FFCP PHASE1:Hg19::chr9:95298978..95299010,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1842 | |EntrezGene=1842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3154 | |HGNC=3154 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T9F4 | |UniProt=Q5T9F4 | ||
|association_with_transcript=-41bp_to_ENST00000395534_5end | |association_with_transcript=-41bp_to_ENST00000395534_5end | ||
|cluster_id=chr9:95298978..95299010,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_5_at_ECM2_5end | |description=CAGE_peak_5_at_ECM2_5end | ||
|id=chr9:95298978..95299010,- | |id=chr9:95298978..95299010,- | ||
|ontology_enrichment_celltype=CL:0000136!1.61e-10!15 | |ontology_enrichment_celltype=CL:0000136!1.61e-10!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.08e-15;13!CL:0002617;4.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.84e-16,15;CL:0002617,2.66e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.08e-07;4!UBERON:0007284;1.08e-07;4!UBERON:0007297;4.09e-07;2!UBERON:0006965;5.31e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-31!115;UBERON:0001049!7.65e-09!57;UBERON:0005068!7.65e-09!57;UBERON:0006241!7.65e-09!57;UBERON:0007135!7.65e-09!57;UBERON:0002616!3.22e-08!59;UBERON:0000475!5.74e-08!365;UBERON:0001017!2.24e-07!82;UBERON:0002346!3.29e-07!90;UBERON:0005743!3.43e-07!86;UBERON:0003075!6.02e-07!86;UBERON:0007284!6.02e-07!86;UBERON:0000955!8.95e-07!69;UBERON:0006238!8.95e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!1.52e-31!115;UBERON:0001049!7.65e-09!57;UBERON:0005068!7.65e-09!57;UBERON:0006241!7.65e-09!57;UBERON:0007135!7.65e-09!57;UBERON:0002616!3.22e-08!59;UBERON:0000475!5.74e-08!365;UBERON:0001017!2.24e-07!82;UBERON:0002346!3.29e-07!90;UBERON:0005743!3.43e-07!86;UBERON:0003075!6.02e-07!86;UBERON:0007284!6.02e-07!86;UBERON:0000955!8.95e-07!69;UBERON:0006238!8.95e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.89e-10;3!UBERON:0000946;3.89e-10;3!UBERON:0006947;6.17e-10;3!UBERON:0004054;6.17e-10;3!UBERON:0003135;1.22e-09;11!UBERON:0001443;1.77e-09;11!UBERON:0000310;1.51e-07;10!UBERON:0005904;1.51e-07;4!UBERON:0002133;3.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.45e-16,114;UBERON:0003978,3.45e-10,3;UBERON:0009751,3.45e-10,3;UBERON:0000946,3.45e-10,3;UBERON:0002523,3.45e-10,3;UBERON:0005983,3.45e-10,3;UBERON:0002165,3.45e-10,3;UBERON:0002062,3.45e-10,3;UBERON:0007280,3.45e-10,3;UBERON:0006947,6.80e-10,3;UBERON:0004054,6.80e-10,3;UBERON:0001443,1.42e-09,11;UBERON:0003135,1.57e-09,11;UBERON:0000310,1.44e-07,10;UBERON:0005904,1.63e-07,4;UBERON:0002133,2.83e-07,2 | |||
|phase1_expression=1.63510541343501,3.63970890614671,4.08767771878316,0,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.361439152384566,0.50133791063589,0.869079113764942,0.795285947051099,0.486634870302636,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0,0,0.454072282934794,2.88087962239999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0,0.675105328965065,0.487185025805993,0.252433774244115,0.0920498986422993,0.969876340912871,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,6.87979051674338,8.27105869353966,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0.831883446123229,1.24900292158013,0.473107245101804,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,2.60885354589706,1.12264037773229,1.02511319404561,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.328508624055237,0,0,0,0,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1588393744312,0.27470839445503,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,0,0,0,0,0,0,9.97924288233859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,6.59286806723523,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.39473591775749,0.828851746593443,0,0.102268682502155,0,0.622079175323615,0,0,0,1.1837208676432,0,0,0,0.463840490809256,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.331737779793674,0,0.438770794307945,0,0,3.38581137416707,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0,0,0.202203398942031,1.60515529459758,0.234264445725339,0,0,0,2.76209081994573,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,0.678923115418936,0,1.35588444468319,0,0,0.50648636764703,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30636562417283,3.43740636017525,1.43574604915363,0.199679000498991,0,0,0.335917362433631,0.360299883542404,0,0,0.0824158583811665,0,0.0984274815147488,0,0,1.77064427945048,0,0,0,0,0,0.0607495566580247,0,2.67939404817274,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,9.81899965643152,1.32506888912221,0.129282956361551,0,0,0,1.81538601365081,6.13096789888697,0.414239055347196,0.496166021811951,0,0,0,21.760712134779,20.055191521816,31.5535944066365,29.5085367638824,0,0,0.122026264901963,0.500763722825999,1.14681839138014,1.22021956690538,0.248385611765534,0,0,0,0,0,0,0,0,0.467426619694449,0,0.568209015825267,0.754703705257725,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,1.37358282073117,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0.954013051960256,0,0,0,0,0.128458450192919,1.41696576325585,0,0.205116364240755,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,2.18807844327902,5.94161593959132,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,3.47347824872506,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,0.514464028312255,0.203909198930495,0,0,0,3.84616154967519,0,0.280272163313789,0,0,0,0.571812353413251,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,0.647428837187895,0.307988420568741,1.1598144313382,2.91426595835484,0,0.198950775161368,0,0,0,0,1.00326405540328,0.437119121007915,0,1.71603825227734,0,0.981542335574726,0,1.2679671827502,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,1.84870251452567,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,3.48582011803901,1.07185652062471,0,0.413731983447581,1.0661699095049,0.714193294391221,0.129177819672012,0.0620747142958579,0,0.12729431655633,0,1.08858373948481,0,0.336760265072938,0.573777643141411,0.332660356546013,0,0,0,0.0898252021065869,0,1.95586310692586,0.406896178315738,0,2.41528552309231,0 | |phase1_expression=1.63510541343501,3.63970890614671,4.08767771878316,0,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.361439152384566,0.50133791063589,0.869079113764942,0.795285947051099,0.486634870302636,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0,0,0.454072282934794,2.88087962239999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0,0.675105328965065,0.487185025805993,0.252433774244115,0.0920498986422993,0.969876340912871,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,6.87979051674338,8.27105869353966,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0.831883446123229,1.24900292158013,0.473107245101804,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,2.60885354589706,1.12264037773229,1.02511319404561,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.328508624055237,0,0,0,0,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1588393744312,0.27470839445503,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,0,0,0,0,0,0,9.97924288233859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,6.59286806723523,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.39473591775749,0.828851746593443,0,0.102268682502155,0,0.622079175323615,0,0,0,1.1837208676432,0,0,0,0.463840490809256,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.331737779793674,0,0.438770794307945,0,0,3.38581137416707,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0,0,0.202203398942031,1.60515529459758,0.234264445725339,0,0,0,2.76209081994573,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,0.678923115418936,0,1.35588444468319,0,0,0.50648636764703,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30636562417283,3.43740636017525,1.43574604915363,0.199679000498991,0,0,0.335917362433631,0.360299883542404,0,0,0.0824158583811665,0,0.0984274815147488,0,0,1.77064427945048,0,0,0,0,0,0.0607495566580247,0,2.67939404817274,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,9.81899965643152,1.32506888912221,0.129282956361551,0,0,0,1.81538601365081,6.13096789888697,0.414239055347196,0.496166021811951,0,0,0,21.760712134779,20.055191521816,31.5535944066365,29.5085367638824,0,0,0.122026264901963,0.500763722825999,1.14681839138014,1.22021956690538,0.248385611765534,0,0,0,0,0,0,0,0,0.467426619694449,0,0.568209015825267,0.754703705257725,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,1.37358282073117,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0.954013051960256,0,0,0,0,0.128458450192919,1.41696576325585,0,0.205116364240755,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,2.18807844327902,5.94161593959132,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,3.47347824872506,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,0.514464028312255,0.203909198930495,0,0,0,3.84616154967519,0,0.280272163313789,0,0,0,0.571812353413251,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0,0,0,0,0,0.647428837187895,0.307988420568741,1.1598144313382,2.91426595835484,0,0.198950775161368,0,0,0,0,1.00326405540328,0.437119121007915,0,1.71603825227734,0,0.981542335574726,0,1.2679671827502,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,1.84870251452567,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,3.48582011803901,1.07185652062471,0,0.413731983447581,1.0661699095049,0.714193294391221,0.129177819672012,0.0620747142958579,0,0.12729431655633,0,1.08858373948481,0,0.336760265072938,0.573777643141411,0.332660356546013,0,0,0,0.0898252021065869,0,1.95586310692586,0.406896178315738,0,2.41528552309231,0 | ||
|short_description=p5@ECM2 | |short_description=p5@ECM2 | ||
}} | }} |
Latest revision as of 07:32, 18 September 2015
Short description: | p5@ECM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ECM2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -41bp_to_ENST00000395534_5end |
EntrezGene: | ECM2 |
HGNC: | 3154 |
UniProt: | Q5T9F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.84e-16 | 15 |
adipocyte of breast | 2.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.45e-16 | 114 |
valve | 3.45e-10 | 3 |
cardiac mesenchyme | 3.45e-10 | 3 |
cardial valve | 3.45e-10 | 3 |
tunica intima | 3.45e-10 | 3 |
heart layer | 3.45e-10 | 3 |
endocardium | 3.45e-10 | 3 |
endocardial cushion | 3.45e-10 | 3 |
presumptive endocardium | 3.45e-10 | 3 |
male genital duct | 6.80e-10 | 3 |
internal male genitalia | 6.80e-10 | 3 |
chest | 1.42e-09 | 11 |
male reproductive organ | 1.57e-09 | 11 |
breast | 1.44e-07 | 10 |
duct of male reproductive system | 1.63e-07 | 4 |
atrioventricular valve | 2.83e-07 | 2 |