FFCP PHASE1:Hg19::chrX:2794101..2794104,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:2794101..2794104,+ | |||
|description=CAGE_peak_at_chrX:2794101..2794104,+ | |description=CAGE_peak_at_chrX:2794101..2794104,+ | ||
|id=chrX:2794101..2794104,+ | |id=chrX:2794101..2794104,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.95e-08;2!CL:0000047;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.09e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!2.33e-10!22;DOID:2994!2.33e-10!22;DOID:171!1.25e-07!10 | |ontology_enrichment_disease=DOID:3095!2.33e-10!22;DOID:2994!2.33e-10!22;DOID:171!1.25e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;9.27e-13;10!DOID:1909;7.52e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.23e-13,10;DOID:1909,6.58e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.18e-17!94;UBERON:0001016!1.18e-17!94;UBERON:0005743!9.49e-17!86;UBERON:0001017!8.44e-16!82;UBERON:0000924!6.35e-15!173;UBERON:0006601!6.35e-15!173;UBERON:0002346!1.15e-14!90;UBERON:0004121!1.39e-12!169;UBERON:0003075!7.96e-12!86;UBERON:0007284!7.96e-12!86;UBERON:0001049!2.68e-11!57;UBERON:0005068!2.68e-11!57;UBERON:0006241!2.68e-11!57;UBERON:0007135!2.68e-11!57;UBERON:0000955!1.48e-10!69;UBERON:0006238!1.48e-10!69;UBERON:0000153!4.71e-09!129;UBERON:0007811!4.71e-09!129;UBERON:0000033!6.07e-09!123;UBERON:0002298!3.53e-08!8;UBERON:0003076!8.97e-08!15;UBERON:0003057!8.97e-08!15;UBERON:0002616!9.31e-08!59;UBERON:0003056!1.13e-07!61;UBERON:0007023!3.72e-07!115 | |ontology_enrichment_uberon=UBERON:0000073!1.18e-17!94;UBERON:0001016!1.18e-17!94;UBERON:0005743!9.49e-17!86;UBERON:0001017!8.44e-16!82;UBERON:0000924!6.35e-15!173;UBERON:0006601!6.35e-15!173;UBERON:0002346!1.15e-14!90;UBERON:0004121!1.39e-12!169;UBERON:0003075!7.96e-12!86;UBERON:0007284!7.96e-12!86;UBERON:0001049!2.68e-11!57;UBERON:0005068!2.68e-11!57;UBERON:0006241!2.68e-11!57;UBERON:0007135!2.68e-11!57;UBERON:0000955!1.48e-10!69;UBERON:0006238!1.48e-10!69;UBERON:0000153!4.71e-09!129;UBERON:0007811!4.71e-09!129;UBERON:0000033!6.07e-09!123;UBERON:0002298!3.53e-08!8;UBERON:0003076!8.97e-08!15;UBERON:0003057!8.97e-08!15;UBERON:0002616!9.31e-08!59;UBERON:0003056!1.13e-07!61;UBERON:0007023!3.72e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002050;6.94e-43;5!UBERON:0005423;6.94e-43;5!UBERON:0002346;6.98e-31;4!UBERON:0000923;6.98e-31;4!UBERON:0010316;6.98e-31;4!UBERON:0005291;6.98e-31;4!UBERON:0005795;2.10e-14;1!UBERON:0006955;3.95e-08;2!UBERON:0004801;3.95e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.09e-08,2;UBERON:0004801,4.09e-08,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.265059536642971,0.580969714347592,0.310983165046111,0,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507983154337352,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0.103041011647722,0.824125183365091,1.32015199872941,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,3.02319297425131,0.102268682502155,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.227884111694002,0.69169171316418,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,0,0.353830258013357,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.189932387867636,0.195551382734803,0,0,0,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0,0,0.313808538937,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.404421263125109,0.196854963029498,0,0,0.408610218334727,0.482259445395058,0.962776056180637,0.83088067605837,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.904980694530854,0.66116300871345,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0.544017803369474,2.2562090462043,0.306345576763462,0,0,0,0,0,2.29363678276028,0.554645257684261,0.496771223531068,0.138348634936231,0.249960815924213,1.51649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0.314531883711793,0.218419276384028,2.54598794931038,8.50299680406732,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0.756215088665154,0,0,0,0,0.235939446695481,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,2.81393990975393,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0.857718530119876,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.83244063544298,0,0.219881033490858,0,0,0.655678681511872,0,0.245148321753905,0,0.588925401344836,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0.872701380680755,0,0,0,0,0.252332849670158,0.437062287854782,0.886889507080059,0.305966489225945,0.534434810531121,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0.665320713092027,0,0.106727345877715,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.265059536642971,0.580969714347592,0.310983165046111,0,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507983154337352,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0.103041011647722,0.824125183365091,1.32015199872941,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,3.02319297425131,0.102268682502155,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.227884111694002,0.69169171316418,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,0,0.353830258013357,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.189932387867636,0.195551382734803,0,0,0,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0,0,0.313808538937,0,0.288950589901519,0.600420288709789,0,0,0.429765441419957,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.404421263125109,0.196854963029498,0,0,0.408610218334727,0.482259445395058,0.962776056180637,0.83088067605837,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.904980694530854,0.66116300871345,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0.544017803369474,2.2562090462043,0.306345576763462,0,0,0,0,0,2.29363678276028,0.554645257684261,0.496771223531068,0.138348634936231,0.249960815924213,1.51649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0.314531883711793,0.218419276384028,2.54598794931038,8.50299680406732,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0.756215088665154,0,0,0,0,0.235939446695481,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,2.81393990975393,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0.857718530119876,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.83244063544298,0,0.219881033490858,0,0,0.655678681511872,0,0.245148321753905,0,0.588925401344836,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0.872701380680755,0,0,0,0,0.252332849670158,0.437062287854782,0.886889507080059,0.305966489225945,0.534434810531121,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0.665320713092027,0,0.106727345877715,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | ||
|short_description=p@chrX:2794101..2794104,+ | |short_description=p@chrX:2794101..2794104,+ | ||
}} | }} |
Latest revision as of 07:41, 1 August 2015
Short description: | p@chrX:2794101..2794104, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:2794101..2794104, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.09e-08 | 2 |
cervix epithelium | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.23e-13 | 10 |
melanoma | 6.58e-08 | 2 |