FFCP PHASE1:Hg19::chr17:38256590..38256599,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38256590..38256599,-
|short_description=p8@NR1D1
|description=CAGE_peak_8_at_NR1D1_5end
|association_with_transcript=373bp_to_NM_021724,uc002htz.1,uc010cw...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9572 | |EntrezGene=9572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7962 | |HGNC=7962 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8S3,P20393 | |UniProt=F1D8S3,P20393 | ||
|association_with_transcript=373bp_to_NM_021724,uc002htz.1,uc010cwq.1_5end | |||
|cluster_id=chr17:38256590..38256599,- | |||
|description=CAGE_peak_8_at_NR1D1_5end | |||
|id=chr17:38256590..38256599,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.78e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.30e-09;2!UBERON:0009117;8.14e-07;10!UBERON:0005564;8.14e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.31e-24!115;UBERON:0001049!8.65e-09!57;UBERON:0005068!8.65e-09!57;UBERON:0006241!8.65e-09!57;UBERON:0007135!8.65e-09!57;UBERON:0000955!9.93e-08!69;UBERON:0006238!9.93e-08!69;UBERON:0002616!2.22e-07!59;UBERON:0001017!2.88e-07!82;UBERON:0003080!3.04e-07!42;UBERON:0002780!8.56e-07!41;UBERON:0001890!8.56e-07!41;UBERON:0006240!8.56e-07!41;UBERON:0005743!8.79e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.52e-09;11!UBERON:0000473;1.03e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.40e-14,114;UBERON:0003135,1.69e-09,11;UBERON:0000473,1.14e-08,8 | |||
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| ||
|short_description=p8@NR1D1 | |||
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Latest revision as of 23:59, 19 September 2015
Short description: | p8@NR1D1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NR1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 373bp_to_NM_021724, uc002htz.1, uc010cwq.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | F1D8S3P20393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.40e-14 | 114 |
male reproductive organ | 1.69e-09 | 11 |
testis | 1.14e-08 | 8 |