FFCP PHASE1:Hg19::chr2:113979580..113979589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113979580..113979589,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113979580..113979589,- | |description=CAGE_peak_at_chr2:113979580..113979589,- | ||
|id=chr2:113979580..113979589,- | |id=chr2:113979580..113979589,- | ||
|ontology_enrichment_celltype=CL:0002149!3.36e-07!6;CL:0002255!3.36e-07!6 | |ontology_enrichment_celltype=CL:0002149!3.36e-07!6;CL:0002255!3.36e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.48e-40;5 | |||
|ontology_enrichment_disease=DOID:3001!3.36e-07!6 | |ontology_enrichment_disease=DOID:3001!3.36e-07!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.48e-29!3;UBERON:0004054!1.48e-29!3;UBERON:0005904!2.42e-22!4;UBERON:0002113!2.39e-12!27;UBERON:0003918!2.39e-12!27;UBERON:0005095!2.39e-12!27;UBERON:0007687!2.39e-12!27;UBERON:0002134!2.79e-11!1;UBERON:0005208!2.79e-11!1;UBERON:0005946!2.79e-11!1;UBERON:0005965!2.79e-11!1;UBERON:0002078!2.79e-11!1;UBERON:0000998!4.15e-11!1;UBERON:0006868!4.15e-11!1;UBERON:0001000!5.05e-11!1;UBERON:0005352!5.05e-11!1;UBERON:0001301!5.57e-11!1;UBERON:0000489!2.37e-10!32;UBERON:0004175!1.85e-09!25;UBERON:0002046!1.37e-08!5;UBERON:0004117!1.37e-08!5;UBERON:0007689!1.37e-08!5;UBERON:0007123!1.37e-08!5;UBERON:0003091!1.37e-08!5;UBERON:0003135!1.76e-08!11;UBERON:0003103!6.42e-08!69;UBERON:0006554!2.09e-07!44;UBERON:0001008!3.13e-07!45 | |ontology_enrichment_uberon=UBERON:0006947!1.48e-29!3;UBERON:0004054!1.48e-29!3;UBERON:0005904!2.42e-22!4;UBERON:0002113!2.39e-12!27;UBERON:0003918!2.39e-12!27;UBERON:0005095!2.39e-12!27;UBERON:0007687!2.39e-12!27;UBERON:0002134!2.79e-11!1;UBERON:0005208!2.79e-11!1;UBERON:0005946!2.79e-11!1;UBERON:0005965!2.79e-11!1;UBERON:0002078!2.79e-11!1;UBERON:0000998!4.15e-11!1;UBERON:0006868!4.15e-11!1;UBERON:0001000!5.05e-11!1;UBERON:0005352!5.05e-11!1;UBERON:0001301!5.57e-11!1;UBERON:0000489!2.37e-10!32;UBERON:0004175!1.85e-09!25;UBERON:0002046!1.37e-08!5;UBERON:0004117!1.37e-08!5;UBERON:0007689!1.37e-08!5;UBERON:0007123!1.37e-08!5;UBERON:0003091!1.37e-08!5;UBERON:0003135!1.76e-08!11;UBERON:0003103!6.42e-08!69;UBERON:0006554!2.09e-07!44;UBERON:0001008!3.13e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.48e-40;5!UBERON:0002368;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.48e-40,5;UBERON:0004117,1.48e-40,5;UBERON:0007689,1.48e-40,5;UBERON:0007123,1.48e-40,5;UBERON:0003091,1.48e-40,5;UBERON:0009722,2.25e-19,11;UBERON:0007690,2.25e-19,11;UBERON:0008814,1.85e-12,18;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p@chr2:113979580..113979589,- | |short_description=p@chr2:113979580..113979589,- | ||
}} | }} |
Latest revision as of 23:36, 28 July 2015
Short description: | p@chr2:113979580..113979589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113979580..113979589, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.48e-40 | 5 |
pharyngeal pouch | 1.48e-40 | 5 |
thyroid diverticulum | 1.48e-40 | 5 |
pharyngeal pouch 2 | 1.48e-40 | 5 |
thyroid primordium | 1.48e-40 | 5 |
entire pharyngeal arch endoderm | 2.25e-19 | 11 |
early pharyngeal endoderm | 2.25e-19 | 11 |
pharyngeal arch system | 1.85e-12 | 18 |
endocrine gland | 4.03e-07 | 35 |