FFCP PHASE1:Hg19::chr17:40481474..40481498,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:40481474..40481498,-
|short_description=p@chr17:40481474..40481498,-
|description=CAGE_peak_at_chr17:40481474..40481498,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:40481474..40481498,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr17:40481474..40481498,- | |||
|id=chr17:40481474..40481498,- | |||
|ontology_enrichment_celltype=CL:0000066!1.30e-33!254;CL:0000076!1.91e-17!62;CL:0002321!4.88e-17!248;CL:0000220!2.16e-16!246;CL:0000077!9.32e-12!19;CL:0000095!3.13e-07!17;CL:0000123!3.13e-07!17;CL:0002076!6.32e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.36e-19;19!CL:0000076;4.02e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.22e-19,19;CL:0000066,8.63e-19,253;CL:0000076,9.30e-15,63;CL:0002097,8.76e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.46e-08;29 | |||
|ontology_enrichment_disease=DOID:305!3.70e-20!106;DOID:0050687!9.27e-19!143;DOID:14566!3.38e-13!239;DOID:162!1.40e-12!235;DOID:1749!4.62e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.38e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.83e-20,106;DOID:0050687,1.51e-17,143;DOID:14566,3.92e-17,239;DOID:162,9.55e-17,235;DOID:1749,2.72e-09,14;DOID:4468,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.04e-08!9;UBERON:0000072!5.06e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.19e-10;9!UBERON:0001557;4.19e-10;9!UBERON:0002369;5.85e-09;3!UBERON:0001235;5.85e-09;3!UBERON:0006858;5.85e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.02e-10,9;UBERON:0002369,3.88e-09,3;UBERON:0001235,3.88e-09,3;UBERON:0006858,3.88e-09,3 | |||
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| ||
|short_description=p@chr17:40481474..40481498,- | |||
}} | }} |
Latest revision as of 17:00, 25 July 2015
Short description: | p@chr17:40481474..40481498, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40481474..40481498, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.22e-19 | 19 |
epithelial cell | 8.63e-19 | 253 |
squamous epithelial cell | 9.30e-15 | 63 |
cortical cell of adrenal gland | 8.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.02e-10 | 9 |
adrenal gland | 3.88e-09 | 3 |
adrenal cortex | 3.88e-09 | 3 |
adrenal/interrenal gland | 3.88e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.83e-20 | 106 |
cell type cancer | 1.51e-17 | 143 |
disease of cellular proliferation | 3.92e-17 | 239 |
cancer | 9.55e-17 | 235 |
squamous cell carcinoma | 2.72e-09 | 14 |
clear cell adenocarcinoma | 9.02e-07 | 2 |