FFCP PHASE1:Hg19::chr3:193854589..193854595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:193854589..193854595,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_at_chr3:193854589..193854595,+ | |description=CAGE_peak_at_chr3:193854589..193854595,+ | ||
|id=chr3:193854589..193854595,+ | |id=chr3:193854589..193854595,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.05e-07!5;CL:0000569!3.76e-07!4;CL:0000011!3.76e-07!4 | |ontology_enrichment_celltype=CL:0002322!2.05e-07!5;CL:0000569!3.76e-07!4;CL:0000011!3.76e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.65e-28;13!CL:0002593;5.69e-21;2!CL:0000945;1.07e-15;24!CL:0002595;3.22e-09;5!CL:0000542;8.28e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.17e-26,14;CL:0002593,6.96e-21,2;CL:0000945,1.07e-15,24;CL:0000826,1.07e-15,24;CL:0002595,3.49e-09,5;CL:0000838,1.12e-07,52;CL:0000542,1.52e-07,53;CL:0000051,1.52e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000051;8.28e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.69e-21;2!UBERON:0003834;3.22e-09;5!UBERON:0001533;3.22e-09;5!UBERON:0003513;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,6.96e-21,2;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0003513,6.39e-07,7 | |||
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| ||
|short_description=p@chr3:193854589..193854595,+ | |short_description=p@chr3:193854589..193854595,+ | ||
}} | }} |
Latest revision as of 19:35, 29 July 2015
Short description: | p@chr3:193854589..193854595, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:193854589..193854595, + |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.17e-26 | 14 |
smooth muscle cell of the internal thoracic artery | 6.96e-21 | 2 |
lymphocyte of B lineage | 1.07e-15 | 24 |
pro-B cell | 1.07e-15 | 24 |
smooth muscle cell of the subclavian artery | 3.49e-09 | 5 |
lymphoid lineage restricted progenitor cell | 1.12e-07 | 52 |
lymphocyte | 1.52e-07 | 53 |
common lymphoid progenitor | 1.52e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 6.96e-21 | 2 |
thoracic segment blood vessel | 3.49e-09 | 5 |
subclavian artery | 3.49e-09 | 5 |
trunk blood vessel | 6.39e-07 | 7 |