FFCP PHASE1:Hg19::chr15:39874364..39874371,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39874364..39874371,+ | |||
|description=CAGE_peak_at_chr15:39874364..39874371,+ | |description=CAGE_peak_at_chr15:39874364..39874371,+ | ||
|id=chr15:39874364..39874371,+ | |id=chr15:39874364..39874371,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.11e-13!75;CL:0000055!3.16e-10!180;CL:0002620!2.01e-08!23;CL:0002371!1.03e-07!591;CL:0000548!7.99e-07!679;CL:0000004!7.99e-07!679;CL:0000255!7.99e-07!679 | |ontology_enrichment_celltype=CL:0000057!2.11e-13!75;CL:0000055!3.16e-10!180;CL:0002620!2.01e-08!23;CL:0002371!1.03e-07!591;CL:0000548!7.99e-07!679;CL:0000004!7.99e-07!679;CL:0000255!7.99e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.30e-12;3!CL:1000428;1.30e-12;3!CL:0002537;6.90e-12;5!CL:0002580;1.12e-11;3!CL:0002545;4.99e-08;2!CL:0002617;4.99e-08;2!CL:0002559;1.03e-07;5!CL:0000136;8.99e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.40e-12,3;CL:1000428,1.40e-12,3;CL:0002537,8.27e-12,5;CL:0002580,1.05e-11,3;CL:0000057,3.24e-08,76;CL:0002545,3.37e-08,2;CL:0000136,4.40e-08,15;CL:0002617,4.84e-08,2;CL:0002559,1.07e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.55e-12;5!DOID:450;8.55e-12;5!DOID:66;8.55e-12;5!DOID:423;8.55e-12;5!DOID:0080000;8.55e-12;5!DOID:11722;8.55e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.34e-11,5;DOID:450,1.34e-11,5;DOID:66,1.34e-11,5;DOID:423,1.34e-11,5;DOID:0080000,1.34e-11,5;DOID:11722,1.34e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.03e-10!40;UBERON:0002199!6.43e-10!45;UBERON:0002416!6.43e-10!45;UBERON:0003102!1.06e-08!95;UBERON:0000947!2.10e-08!21;UBERON:0010191!2.10e-08!21;UBERON:0004923!3.87e-08!57;UBERON:0000055!2.27e-07!69;UBERON:0001981!4.80e-07!60;UBERON:0007500!4.80e-07!60;UBERON:0004537!4.80e-07!60;UBERON:0006965!4.80e-07!60;UBERON:0000310!4.81e-07!10 | |ontology_enrichment_uberon=UBERON:0002097!5.03e-10!40;UBERON:0002199!6.43e-10!45;UBERON:0002416!6.43e-10!45;UBERON:0003102!1.06e-08!95;UBERON:0000947!2.10e-08!21;UBERON:0010191!2.10e-08!21;UBERON:0004923!3.87e-08!57;UBERON:0000055!2.27e-07!69;UBERON:0001981!4.80e-07!60;UBERON:0007500!4.80e-07!60;UBERON:0004537!4.80e-07!60;UBERON:0006965!4.80e-07!60;UBERON:0000310!4.81e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.30e-12;3!UBERON:0001992;1.30e-12;3!UBERON:0000310;1.95e-12;10!UBERON:0001443;3.01e-11;11!UBERON:0000305;1.66e-08;7!UBERON:0005800;4.99e-08;2!UBERON:0001515;4.99e-08;2!UBERON:0002073;1.03e-07;5!UBERON:0002097;4.87e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.40e-12,3;UBERON:0001992,1.40e-12,3;UBERON:0000310,1.59e-12,10;UBERON:0001443,2.52e-11,11;UBERON:0002199,5.80e-09,46;UBERON:0002416,5.80e-09,46;UBERON:0002097,1.56e-08,41;UBERON:0000305,1.89e-08,7;UBERON:0005800,3.37e-08,2;UBERON:0001515,3.37e-08,2;UBERON:0002073,1.07e-07,5;UBERON:0005086,1.07e-07,5;UBERON:0004871,2.13e-07,8 | |||
|phase1_expression=1.2717486548939,1.49870366723688,0.704772020479856,1.0007329835313,0.893922188854576,1.74467704820074,5.06599756336621,0,0,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0.331397375727916,2.01697543935533,3.61616716814386,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0.918251677112708,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,1.69592382577203,0,0,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.24406205754817,1.47065232138347,1.62028389576352,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,3.97577561356255,0.506522046658319,0.662045904066094,0.573673241497627,0,0,3.20246987189115,1.72667283892012,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0.277064115484183,0.438977620880838,1.22595118319608,0.600952235626387,0.453728732640084,1.07633781413317,1.92201649936711,0.847727604638247,2.10063767259082,1.03052529238439,1.28820270022815,0.744467425326359,0.675105328965065,0.584622030967192,1.26216887122057,0.644349290496095,0.323292113637624,1.42003837006646,0.604512589365842,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,2.57296375277154,4.14404764057442,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.570762456703795,1.58040879591855,0.858486162094873,0,0,0,0,0,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.86156681609409,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,1.54657762555539,1.84267891867784,0.637938751653163,0,0,0,0.12269149171914,0,0,4.57535895367776,3.56857977594324,4.57337003598411,0.937131319941706,1.20378439891088,0,0,0,0.368738337083406,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0,0,0,1.73675465473144,3.99001130548962,1.12264037773229,0.512556597022804,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0,0,0,0.802025881213139,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0.574265537996172,1.95018073810956,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.267096106940212,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,1.21746226177622,0.30982349809975,0,0,0,1.78335525740625,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,1.19372242368845,1.18785872333055,3.37876772309155,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.898683511473268,0,0,0,0,1.11136990144637,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,1.12198039399954,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,1.50940741051545,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0.464033759878494,2.3885753321917,2.00013882331577,0.686791410365586,1.34699795506368,1.26184898228651,0.192619830407303,0,0,0.453411851024545,0,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,2.4499638188256,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0.115525666150338,0,0,0.596748666348824,0.0752103283492573,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.679708458751268,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0.332660356546013,0.244209805832924,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=1.2717486548939,1.49870366723688,0.704772020479856,1.0007329835313,0.893922188854576,1.74467704820074,5.06599756336621,0,0,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0.331397375727916,2.01697543935533,3.61616716814386,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0.918251677112708,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,1.69592382577203,0,0,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.24406205754817,1.47065232138347,1.62028389576352,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,3.97577561356255,0.506522046658319,0.662045904066094,0.573673241497627,0,0,3.20246987189115,1.72667283892012,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0.277064115484183,0.438977620880838,1.22595118319608,0.600952235626387,0.453728732640084,1.07633781413317,1.92201649936711,0.847727604638247,2.10063767259082,1.03052529238439,1.28820270022815,0.744467425326359,0.675105328965065,0.584622030967192,1.26216887122057,0.644349290496095,0.323292113637624,1.42003837006646,0.604512589365842,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,2.57296375277154,4.14404764057442,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.570762456703795,1.58040879591855,0.858486162094873,0,0,0,0,0,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.86156681609409,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,1.54657762555539,1.84267891867784,0.637938751653163,0,0,0,0.12269149171914,0,0,4.57535895367776,3.56857977594324,4.57337003598411,0.937131319941706,1.20378439891088,0,0,0,0.368738337083406,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0,0,0,1.73675465473144,3.99001130548962,1.12264037773229,0.512556597022804,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0,0,0,0.802025881213139,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0.574265537996172,1.95018073810956,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.267096106940212,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,1.21746226177622,0.30982349809975,0,0,0,1.78335525740625,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,1.19372242368845,1.18785872333055,3.37876772309155,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.898683511473268,0,0,0,0,1.11136990144637,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,1.12198039399954,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,1.50940741051545,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0.464033759878494,2.3885753321917,2.00013882331577,0.686791410365586,1.34699795506368,1.26184898228651,0.192619830407303,0,0,0.453411851024545,0,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,2.4499638188256,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0.115525666150338,0,0,0.596748666348824,0.0752103283492573,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.679708458751268,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0.332660356546013,0.244209805832924,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr15:39874364..39874371,+ | |short_description=p@chr15:39874364..39874371,+ | ||
}} | }} |
Latest revision as of 01:12, 25 July 2015
Short description: | p@chr15:39874364..39874371, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39874364..39874371, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.40e-12 | 3 |
stem cell of epidermis | 1.40e-12 | 3 |
amnion mesenchymal stem cell | 8.27e-12 | 5 |
preadipocyte of the breast | 1.05e-11 | 3 |
fibroblast | 3.24e-08 | 76 |
thoracic aorta endothelial cell | 3.37e-08 | 2 |
fat cell | 4.40e-08 | 15 |
adipocyte of breast | 4.84e-08 | 2 |
hair follicle cell | 1.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.40e-12 | 3 |
papillary layer of dermis | 1.40e-12 | 3 |
breast | 1.59e-12 | 10 |
chest | 2.52e-11 | 11 |
integument | 5.80e-09 | 46 |
integumental system | 5.80e-09 | 46 |
skin of body | 1.56e-08 | 41 |
amnion | 1.89e-08 | 7 |
segment of aorta | 3.37e-08 | 2 |
thoracic aorta | 3.37e-08 | 2 |
hair follicle | 1.07e-07 | 5 |
hair follicle placode | 1.07e-07 | 5 |
somatic layer of lateral plate mesoderm | 2.13e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.34e-11 | 5 |
myotonic disease | 1.34e-11 | 5 |
muscle tissue disease | 1.34e-11 | 5 |
myopathy | 1.34e-11 | 5 |
muscular disease | 1.34e-11 | 5 |
myotonic dystrophy | 1.34e-11 | 5 |