FFCP PHASE1:Hg19::chr17:59316944..59316956,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:59316944..59316956,+ | |||
|description=CAGE_peak_at_chr17:59316944..59316956,+ | |description=CAGE_peak_at_chr17:59316944..59316956,+ | ||
|id=chr17:59316944..59316956,+ | |id=chr17:59316944..59316956,+ | ||
|ontology_enrichment_celltype=CL:0000359!9.11e-11!32;CL:0002150!3.43e-09!3;CL:0000861!3.43e-09!3;CL:0000192!1.87e-07!42;CL:0000514!1.87e-07!42 | |ontology_enrichment_celltype=CL:0000359!9.11e-11!32;CL:0002150!3.43e-09!3;CL:0000861!3.43e-09!3;CL:0000192!1.87e-07!42;CL:0000514!1.87e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000569;1.69e-10;4!CL:0002595;1.22e-08;5!CL:0000359;4.91e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.95e-10,4;CL:0000011,1.95e-10,4;CL:0002595,1.05e-08,5;CL:0000359,2.46e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000011;1.69e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;5.84e-11;1!DOID:0060061;5.84e-11;1!DOID:8691;5.84e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.05e-11,1;DOID:0060061,5.05e-11,1;DOID:8691,5.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0004573!1.16e-08!33;UBERON:0004571!1.16e-08!33;UBERON:0001557!2.96e-08!19;UBERON:0004872!8.50e-08!84 | |ontology_enrichment_uberon=UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0004573!1.16e-08!33;UBERON:0004571!1.16e-08!33;UBERON:0001557!2.96e-08!19;UBERON:0004872!8.50e-08!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.15e-10;1!UBERON:0001961;1.15e-10;1!UBERON:0001744;1.15e-10;1!UBERON:0001042;1.15e-10;1!UBERON:0001735;1.15e-10;1!UBERON:0003834;1.22e-08;5!UBERON:0001533;1.22e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.61e-10,1;UBERON:0001961,1.61e-10,1;UBERON:0001744,1.61e-10,1;UBERON:0001735,1.61e-10,1;UBERON:0003834,1.05e-08,5;UBERON:0001533,1.05e-08,5;UBERON:0004573,4.15e-07,33;UBERON:0004571,4.15e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,2.78526142212934,0,0,0,0.512365278902701,0.260118695119756,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43958489784653,2.70308752059526,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,1.59691809095107,0,0.37064843820784,0.715624433709956,0,0,0,0,0,0.95460974377781,2.35484592059769,0,0,0,0.808729926293264,0,1.68503382495592,0,7.31140468893853,0,0,0,0,0.551365343546124,0,1.75380354101505,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,3.87025325156341,3.50828722013691,3.69519556739442,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0.576219191952599,0,0,0,0,0,0,0.600420288709789,0,0,0,5.5206344398656,0,0,0,0.399358000997982,0,1.11585728720936,0.134366944973453,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,1.79287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,7.12750852445745,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,1.24349760466224,3.40066844976158,0.63718706865481,0,0.465788870628778,0,0.53168342911599,0,1.20206087197775,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,1.14498490124799,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,2.78526142212934,0,0,0,0.512365278902701,0.260118695119756,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43958489784653,2.70308752059526,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,1.59691809095107,0,0.37064843820784,0.715624433709956,0,0,0,0,0,0.95460974377781,2.35484592059769,0,0,0,0.808729926293264,0,1.68503382495592,0,7.31140468893853,0,0,0,0,0.551365343546124,0,1.75380354101505,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,3.87025325156341,3.50828722013691,3.69519556739442,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0.576219191952599,0,0,0,0,0,0,0.600420288709789,0,0,0,5.5206344398656,0,0,0,0.399358000997982,0,1.11585728720936,0.134366944973453,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,1.79287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,7.12750852445745,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,1.24349760466224,3.40066844976158,0.63718706865481,0,0.465788870628778,0,0.53168342911599,0,1.20206087197775,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,1.14498490124799,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:59316944..59316956,+ | |short_description=p@chr17:59316944..59316956,+ | ||
}} | }} |
Latest revision as of 19:34, 25 July 2015
Short description: | p@chr17:59316944..59316956, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:59316944..59316956, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.95e-10 | 4 |
migratory trunk neural crest cell | 1.95e-10 | 4 |
smooth muscle cell of the subclavian artery | 1.05e-08 | 5 |
vascular associated smooth muscle cell | 2.46e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.61e-10 | 1 |
mucosa-associated lymphoid tissue | 1.61e-10 | 1 |
lymphoid tissue | 1.61e-10 | 1 |
tonsillar ring | 1.61e-10 | 1 |
thoracic segment blood vessel | 1.05e-08 | 5 |
subclavian artery | 1.05e-08 | 5 |
systemic artery | 4.15e-07 | 33 |
systemic arterial system | 4.15e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.05e-11 | 1 |
cutaneous T cell lymphoma | 5.05e-11 | 1 |
mycosis fungoides | 5.05e-11 | 1 |