FFCP PHASE1:Hg19::chr21:38338914..38338980,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3141 | |EntrezGene=3141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4976 | |HGNC=4976 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD75,P50747 | |UniProt=C9JD75,P50747 | ||
|association_with_transcript=0bp_to_ENST00000419461,NM_001242784,uc010gnc.1_5end | |association_with_transcript=0bp_to_ENST00000419461,NM_001242784,uc010gnc.1_5end | ||
|cluster_id=chr21:38338914..38338980,- | |||
|description=CAGE_peak_1_at_HLCS_5end | |description=CAGE_peak_1_at_HLCS_5end | ||
|id=chr21:38338914..38338980,- | |id=chr21:38338914..38338980,- | ||
|ontology_enrichment_celltype=CL:0000066!1.19e-07!254 | |ontology_enrichment_celltype=CL:0000066!1.19e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.74e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.40e-12!143;DOID:14566!1.24e-11!239;DOID:162!4.39e-11!235;DOID:305!9.33e-08!106 | |ontology_enrichment_disease=DOID:0050687!2.40e-12!143;DOID:14566!1.24e-11!239;DOID:162!4.39e-11!235;DOID:305!9.33e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.92e-12,143;DOID:14566,8.77e-12,239;DOID:162,3.13e-11,235;DOID:305,8.93e-08,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HLCS | |short_description=p1@HLCS | ||
}} | }} |
Latest revision as of 08:10, 18 September 2015
Short description: | p1@HLCS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLCS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419461, NM_001242784, uc010gnc.1_5end |
EntrezGene: | HLCS |
HGNC: | 4976 |
UniProt: | C9JD75P50747 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.74e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.92e-12 | 143 |
disease of cellular proliferation | 8.77e-12 | 239 |
cancer | 3.13e-11 | 235 |
carcinoma | 8.93e-08 | 106 |