FFCP PHASE1:Hg19::chr2:55844831..55844842,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57223 | |EntrezGene=57223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29267 | |HGNC=29267 | ||
|TSSclassifier=strong | |||
|UniProt=Q5MIZ7 | |UniProt=Q5MIZ7 | ||
|association_with_transcript=-35bp_to_NM_001122964,NM_020463_5end | |association_with_transcript=-35bp_to_NM_001122964,NM_020463_5end | ||
|cluster_id=chr2:55844831..55844842,- | |||
|description=CAGE_peak_5_at_SMEK2_5end | |description=CAGE_peak_5_at_SMEK2_5end | ||
|id=chr2:55844831..55844842,- | |id=chr2:55844831..55844842,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.64e-16!239;DOID:162!2.83e-15!235;DOID:0050687!3.59e-13!143;DOID:305!1.55e-12!106 | |ontology_enrichment_disease=DOID:14566!6.64e-16!239;DOID:162!2.83e-15!235;DOID:0050687!3.59e-13!143;DOID:305!1.55e-12!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.21e-11,235;DOID:14566,5.39e-11,239;DOID:0050687,8.64e-11,143;DOID:305,2.79e-09,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@SMEK2 | |short_description=p5@SMEK2 | ||
}} | }} |
Latest revision as of 17:43, 17 September 2015
Short description: | p5@SMEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SMEK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_NM_001122964, NM_020463_5end |
EntrezGene: | SMEK2 |
HGNC: | 29267 |
UniProt: | Q5MIZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 3.21e-11 | 235 |
disease of cellular proliferation | 5.39e-11 | 239 |
cell type cancer | 8.64e-11 | 143 |
carcinoma | 2.79e-09 | 106 |