FFCP PHASE1:Hg19::chr3:133380677..133380690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11073 | |EntrezGene=11073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17008 | |HGNC=17008 | ||
|TSSclassifier=strong | |||
|UniProt=Q92547,A0AV47,A7E2X7,Q05BV8 | |UniProt=Q92547,A0AV47,A7E2X7,Q05BV8 | ||
|association_with_transcript=46bp_to_ENST00000260810,NM_007027,uc003eps.2_5end | |association_with_transcript=46bp_to_ENST00000260810,NM_007027,uc003eps.2_5end | ||
|cluster_id=chr3:133380677..133380690,- | |||
|description=CAGE_peak_3_at_TOPBP1_5end | |description=CAGE_peak_3_at_TOPBP1_5end | ||
|id=chr3:133380677..133380690,- | |id=chr3:133380677..133380690,- | ||
|ontology_enrichment_celltype=CL:0002319!6.52e-07!25 | |ontology_enrichment_celltype=CL:0002319!6.52e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.20e-10;5!CL:0002253;6.30e-08;2!CL:0000047;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.07e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.09e-14!235;DOID:14566!1.56e-13!239;DOID:0050687!1.05e-10!143;DOID:305!3.60e-09!106 | |ontology_enrichment_disease=DOID:162!3.09e-14!235;DOID:14566!1.56e-13!239;DOID:0050687!1.05e-10!143;DOID:305!3.60e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.36e-13;22!DOID:2994;5.36e-13;22!DOID:171;3.51e-11;10!DOID:169;7.01e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.29e-13,22;DOID:2994,7.29e-13,22;DOID:0050687,3.70e-11,143;DOID:171,1.21e-10,10;DOID:169,1.13e-08,6;DOID:162,1.17e-08,235;DOID:14566,2.60e-08,239;DOID:305,6.96e-08,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.20e-10;5!UBERON:0002410;1.20e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.14e-10,5;UBERON:0002410,2.14e-10,5 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.662794751455832,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,1.43117993565528,1.09499540058307,0.627713197974014,0.382067028739756,0.246301768349837,0.236132343941038,0,0.383829398097213,0,0,0,0,0.309868802321207,0.142169232487422,0.587200878669695,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0.453237370790265,0,0.34362744548263,0,0,0,0,0,0,0,0,0.821127996921047,0,0.267440195783507,0.434473211648397,2.43806866313962,0,0.255725123687061,0,0,0,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.892997282840798,0.898117490504679,0.225222960966644,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.653847612453835,0.756787138224657,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.421352420106746,0,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.841680569770331,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0.89694817844431,0,0,0.600182192168805,0.309157587715317,0,0,0.506328996723799,0.194874010322397,0,0,0,0,0.604512589365842,0.169560592310488,0.193260853163297,0,0.286804595389004,0.243947412259191,0.927708378250397,1.74290914304278,0.725627385107593,0.756962552626885,1.45990943630332,0,0,0,0,0.721879481669586,0.709840800239063,0,0,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.860919069801795,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0,0,0.492434012174795,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.176096868026452,0,0,0,0.444485260045183,0.381988425558278,0,0,0.205654985406647,0,0,0.224262168690721,0,0.51336800074665,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0.788123040807709,0.431255149719035,0.256686072559497,1.01637849688985,1.30139853857622,0,0,0.637938751653163,1.49801404789436,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,1.45031339509947,0,0,0.34444334449382,0.364182336013434,0.393373244878272,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0.512900250232778,0.328014645699706,0,0.206082023295445,1.19040304263846,1.40266149865,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0,0.340906509664404,0.445160178233687,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,1.81600920916704,0,0,1.48642540100575,0.28853842595289,2.06311345710401,0.159426272728822,0.399158742865633,0.383010740264733,0.635020748171649,0.649243880549111,0,0.456469358066384,0,0,1.52362600021443,0.1605880751037,0.201799707191048,0,0,1.22896305723383,0.894704431569664,0.500547425135725,0.390776190804081,0.556812347790485,0,1.6227340708559,0,0,0.37428108081644,0.293016358543788,0.121360521749513,0.222886768554957,0.568272293612826,0,0.296964680832639,0,0,0,0,0.494411622680279,1.26675244876796,0,0.276283915531148,1.0077309914171,0.306806047506464,0.492339221844278,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0.1137934482855,0.254253650292766,0.236387681767936,0,1.16641845353302,2.77799991893268,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0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| ||
|short_description=p3@TOPBP1 | |short_description=p3@TOPBP1 | ||
}} | }} |
Latest revision as of 21:25, 24 September 2015
Short description: | p3@TOPBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TOPBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000260810, NM_007027, uc003eps.2_5end |
EntrezGene: | TOPBP1 |
HGNC: | 17008 |
UniProt: | Q92547A0AV47A7E2X7Q05BV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.07e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.14e-10 | 5 |
autonomic nervous system | 2.14e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.29e-13 | 22 |
germ cell cancer | 7.29e-13 | 22 |
cell type cancer | 3.70e-11 | 143 |
neuroectodermal tumor | 1.21e-10 | 10 |
neuroendocrine tumor | 1.13e-08 | 6 |
cancer | 1.17e-08 | 235 |
disease of cellular proliferation | 2.60e-08 | 239 |
carcinoma | 6.96e-08 | 106 |