FFCP PHASE1:Hg19::chr17:74380734..74380745,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:74380734..74380745,+
|short_description=p10@SPHK1
|description=CAGE_peak_10_at_SPHK1_5end
|association_with_transcript=44bp_to_ENST00000323374,NM_00114260...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8877 | |EntrezGene=8877 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11240 | |HGNC=11240 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYA1,Q53ZR5,Q96GK1 | |UniProt=Q9NYA1,Q53ZR5,Q96GK1 | ||
|association_with_transcript=44bp_to_ENST00000323374,NM_001142601,NM_021972,NM_182965,uc002jrh.2,uc002jri.2,uc002jrj.2,uc010wtc.1_5end | |||
|cluster_id=chr17:74380734..74380745,+ | |||
|description=CAGE_peak_10_at_SPHK1_5end | |||
|id=chr17:74380734..74380745,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.37e-16!591;CL:0000548!4.51e-16!679;CL:0000004!4.51e-16!679;CL:0000255!4.51e-16!679;CL:0000012!1.45e-15!682;CL:0000144!9.55e-15!625;CL:0000860!3.58e-12!45;CL:0002057!1.23e-11!42;CL:0000003!1.26e-11!722;CL:0000055!9.87e-10!180;CL:0000723!1.28e-09!436;CL:0000048!1.52e-09!430;CL:0000359!3.35e-09!32;CL:0000183!6.76e-09!59;CL:0000034!1.50e-08!444;CL:0000063!1.63e-08!578;CL:0000680!1.77e-08!57;CL:0000056!1.77e-08!57;CL:0000355!1.77e-08!57;CL:0000187!2.85e-08!54;CL:0002194!4.80e-08!63;CL:0000576!4.80e-08!63;CL:0000040!4.80e-08!63;CL:0000559!4.80e-08!63;CL:0002009!7.04e-08!65;CL:0000393!6.24e-07!60;CL:0000211!6.24e-07!60;CL:0000839!6.58e-07!70;CL:0000222!9.59e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-13;33!CL:0002057;1.45e-13;33!CL:0000576;3.33e-08;48!CL:0000473;6.82e-08;39!CL:0000234;6.82e-08;39!CL:0002592;8.88e-08;3!CL:0002166;2.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-13,42;CL:0002057,1.68e-13,42;CL:0000473,3.13e-11,48;CL:0000234,3.13e-11,48;CL:0002194,4.27e-08,59;CL:0000576,4.27e-08,59;CL:0000040,4.27e-08,59;CL:0000559,4.27e-08,59;CL:0002009,1.07e-07,61;CL:0002166,1.35e-07,3;CL:0002592,1.66e-07,3;CL:0000839,8.19e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.14e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.52e-12!82;UBERON:0002204!4.04e-12!167;UBERON:0001637!1.96e-11!42;UBERON:0003509!1.96e-11!42;UBERON:0004572!1.96e-11!42;UBERON:0003081!1.98e-11!216;UBERON:0004872!1.62e-10!84;UBERON:0001981!3.09e-10!60;UBERON:0007500!3.09e-10!60;UBERON:0004537!3.09e-10!60;UBERON:0006965!3.09e-10!60;UBERON:0000055!4.78e-10!69;UBERON:0000914!1.34e-09!83;UBERON:0002329!1.34e-09!83;UBERON:0003077!1.34e-09!83;UBERON:0003059!1.34e-09!83;UBERON:0007282!1.34e-09!83;UBERON:0009618!1.34e-09!83;UBERON:0007285!1.34e-09!83;UBERON:0002049!2.99e-09!79;UBERON:0007798!2.99e-09!79;UBERON:0004290!3.81e-09!70;UBERON:0000926!5.18e-09!448;UBERON:0004120!5.18e-09!448;UBERON:0006603!5.18e-09!448;UBERON:0004535!5.35e-09!110;UBERON:0004573!1.01e-08!33;UBERON:0004571!1.01e-08!33;UBERON:0001009!2.97e-08!113;UBERON:0003914!4.90e-08!118;UBERON:0000467!2.35e-07!625;UBERON:0000480!3.07e-07!626;UBERON:0000468!3.98e-07!659;UBERON:0001134!4.09e-07!61;UBERON:0002036!4.09e-07!61;UBERON:0003082!4.09e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.69e-09;42!UBERON:0003509;9.69e-09;42!UBERON:0004572;9.69e-09;42!UBERON:0004573;6.76e-08;33!UBERON:0004571;6.76e-08;33!UBERON:0003498;8.88e-08;3!UBERON:0005985;8.88e-08;3!UBERON:0001621;8.88e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.50e-10,42;UBERON:0003509,7.50e-10,42;UBERON:0004572,7.50e-10,42;UBERON:0003081,1.59e-09,203;UBERON:0007500,3.75e-09,59;UBERON:0001981,3.75e-09,59;UBERON:0004537,3.75e-09,59;UBERON:0006965,3.75e-09,59;UBERON:0004573,7.89e-09,33;UBERON:0004571,7.89e-09,33;UBERON:0004872,1.50e-08,83;UBERON:0002204,3.82e-08,167;UBERON:0003914,8.98e-08,117;UBERON:0000926,1.32e-07,315;UBERON:0004120,1.32e-07,315;UBERON:0006603,1.32e-07,315;UBERON:0001621,1.66e-07,3;UBERON:0003498,2.25e-07,5;UBERON:0005985,2.25e-07,5;UBERON:0000055,2.39e-07,68;UBERON:0000486,8.22e-07,83 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.422863212287913,0,2.23480547213644,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0.672325146451775,1.20538905604795,0,1.95173119516203,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.309632246632152,3.67768489791571,2.71085326900425,0.739508020333575,0,0,0,1.66198622559563,0.200544447470142,1.08505435357926,0,0,0,0.290796477559129,1.88937971844405,0.727752183563449,0.697287110717054,3.28934310417461,2.16794459626573,0.575384784644301,0.768482119587302,1.6553756092201,0.344745680736619,0,1.35426486594342,1.69418105588344,2.45615535052061,1.34834090667051,1.22433556948361,2.24650318953266,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0.580418477257168,1.13477044938228,3.73693349397345,0.251248665256743,1.0429658368404,1.08594422352558,0,1.84138817993782,1.58231193720442,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0.221729397462564,0.087834785693126,0.130979075497713,0.728590576585084,0,0,0.174129737299267,0,0,0,0.371457501329565,0.596287222100115,1.72046919021225,1.73570250803797,0,0,1.10047216776027,1.25396979922086,0.775250277507987,0,0.33472061276467,0,0,1.70843440283719,0,0,0.267899184852239,0.22452937262617,0.337834441449967,3.06633274931766,0,1.64881569537367,0,0,0,0,0.379891534993739,0.529636723252875,1.14734648299525,0,0.560677600142307,1.06748995729705,1.97334038733728,0,0.538842688278752,0.490385709340376,0,0,0,0.936480230490962,1.1409436430889,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,1.18800285728205,0.247266929278557,0,0.718618141816238,0,0,0,0,0.30648779579902,1.20190447125277,0.567160915800105,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0.515262646192195,0.257640540045629,0.18611685633159,0.675105328965065,0.487185025805993,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.403008392910561,0.508681776931463,0.57978255948989,1.09098448236334,1.72082757233402,0,0,0,0,0,0,3.12899064659632,0,2.76269842704961,0,0,0.118306800039844,0.505754070234305,0.482022059766964,0.661763836394364,0.435758888184812,0,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0.343135620597051,0.658501712451753,0,0.100528972411631,0.277765335475589,0,0,0,0.579652024875384,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,0,0,1.87467667973554,1.17587489739202,1.55952606966625,0.179117045405697,0.871901815541886,1.91691339582606,0,0,0,0.144119953416961,0,0.253991577168676,0.763976851116555,0,0,0.411309970813294,0.300343057843917,0,0.224262168690721,0.43596006883328,0.22001485746285,0.258543431515556,0,5.917119267892,0.26593811658487,0,0.257207374262142,0,0.799266537048298,0,0,0.823240336780769,1.95441710576241,0,0.791951872933429,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,0,1.42636905040718,0.579125226670317,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0,0,1.03473071292505,0,1.10621501125022,0,1.17480694477644,2.05886054286514,0,0,0.106727557803444,0,0,0,0,1.38115775959256,0.561320188866147,0,0,0.482561763430822,5.93672265779964,1.3878872442239,2.13074070375753,0.0821271560138091,0,0.929683027679674,0,1.20303882181971,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.850468526382578,0.863663664408557,1.54227252690289,0,0,0,0,0,0,0.522870902049801,0.512900250232778,0,0.325378394664303,0,0.0915694648183434,0,1.72279661398852,0.650060246036521,0,0.193341436584244,0.462145851343933,0.15350367472613,1.37836572484531,0,0.290033387828457,0.596586391912706,0.178064071293475,0.495854746082934,0.576570202095319,1.78657797492418,0.2023155617111,0.464845549297286,0.62962469366128,0.6970372701606,0.308033580176089,1.06461206063404,0,0.74129687641568,0.858749320451947,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,3.13979456079692,0,0,0.117812402345686,1.01091240786658,1.58510321173008,2.10629228119491,0,1.70599442741899,0,0.136499911407986,0,1.13008116620243,0,1.32687795048244,1.31535265576129,0,0,0.405820753925408,0.30982349809975,0.845086807596724,0.143411352204052,0,0.35667105148125,0.354761064070598,1.05553817648832,0,0,0,0.384888450902048,2.68120910214315,3.26672954583968,0,2.15252686335615,1.68471475667626,0.886860307073351,0.689170200620878,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0,0.333926115068718,0.824019371133798,0,0.398495976502139,0,0,0,0,0.622079175323615,0,0.537063524026827,0,0,0,0,0,0,0,0,0.262379999988587,1.44999915086959,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.1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| ||
|short_description=p10@SPHK1 | |||
}} | }} |
Latest revision as of 14:53, 17 September 2015
Short description: | p10@SPHK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SPHK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000323374, NM_001142601, NM_021972, NM_182965, uc002jrh.2, uc002jri.2, uc002jrj.2, uc010wtc.1_5end |
EntrezGene: | SPHK1 |
HGNC: | 11240 |
UniProt: | Q9NYA1Q53ZR5Q96GK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-13 | 42 |
defensive cell | 3.13e-11 | 48 |
phagocyte | 3.13e-11 | 48 |
monopoietic cell | 4.27e-08 | 59 |
monocyte | 4.27e-08 | 59 |
monoblast | 4.27e-08 | 59 |
promonocyte | 4.27e-08 | 59 |
macrophage dendritic cell progenitor | 1.07e-07 | 61 |
epithelial cell of Malassez | 1.35e-07 | 3 |
smooth muscle cell of the coronary artery | 1.66e-07 | 3 |
myeloid lineage restricted progenitor cell | 8.19e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
artery | 7.50e-10 | 42 |
arterial blood vessel | 7.50e-10 | 42 |
arterial system | 7.50e-10 | 42 |
lateral plate mesoderm | 1.59e-09 | 203 |
epithelial tube open at both ends | 3.75e-09 | 59 |
blood vessel | 3.75e-09 | 59 |
blood vasculature | 3.75e-09 | 59 |
vascular cord | 3.75e-09 | 59 |
systemic artery | 7.89e-09 | 33 |
systemic arterial system | 7.89e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 1.50e-08 | 83 |
musculoskeletal system | 3.82e-08 | 167 |
epithelial tube | 8.98e-08 | 117 |
mesoderm | 1.32e-07 | 315 |
mesoderm-derived structure | 1.32e-07 | 315 |
presumptive mesoderm | 1.32e-07 | 315 |
coronary artery | 1.66e-07 | 3 |
heart blood vessel | 2.25e-07 | 5 |
coronary vessel | 2.25e-07 | 5 |
vessel | 2.39e-07 | 68 |
multilaminar epithelium | 8.22e-07 | 83 |