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FFCP PHASE1:Hg19::chr17:7990855..7990862,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:7990855..7990862,-
|DHSsupport=supported 
|short_description=p3@ALOX12B
|DPIdataset=robust
|description=CAGE_peak_3_at_ALOX12B_5end
|association_with_transcript=158bp_to_NM_001139,uc002gjy.1_5end
|EntrezGene=242
|EntrezGene=242
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=430
|HGNC=430
|TSSclassifier=strong
|UniProt=O75342
|UniProt=O75342
|association_with_transcript=158bp_to_NM_001139,uc002gjy.1_5end
|cluster_id=chr17:7990855..7990862,-
|coexpression_cluster_id=C263
|description=CAGE_peak_3_at_ALOX12B_5end
|id=chr17:7990855..7990862,-
|ontology_enrichment_celltype=CL:0002623!6.14e-19!3;CL:0000575!1.10e-13!2;CL:0000622!1.39e-11!5;CL:0002251!6.05e-10!21;CL:0000240!7.50e-10!6;CL:0000311!7.50e-10!6;CL:0000079!7.50e-10!6;CL:0000237!7.50e-10!6;CL:0000036!7.50e-10!6;CL:0000357!7.50e-10!6;CL:0000114!7.50e-10!6;CL:0000154!9.83e-10!6;CL:0002159!6.04e-08!13;CL:0002076!6.84e-08!43;CL:0002336!2.83e-07!1;CL:0002261!2.83e-07!1;CL:0002170!2.83e-07!1
|ontology_enrichment_celltype_v019=CL:0000575;9.40e-14;2!CL:0002623;1.30e-09;3!CL:0002159;5.00e-08;14
|ontology_enrichment_celltype_v019_2=CL:0000575,8.28e-14,2;CL:0002623,1.30e-09,3;CL:0002159,4.82e-08,14
|ontology_enrichment_development_v019=UBERON:0008814;7.30e-14;2!UBERON:0010056;7.30e-14;2
|ontology_enrichment_disease=DOID:3151!9.10e-08!1;DOID:3149!9.10e-08!1
|ontology_enrichment_disease_v019=DOID:3151;9.79e-26;1!DOID:3149;9.79e-26;1!DOID:3451;1.37e-13;2!DOID:4159;1.37e-13;2!DOID:0060122;1.37e-13;2
|ontology_enrichment_disease_v019_2=DOID:3151,7.62e-26,1;DOID:3149,7.62e-26,1;DOID:3451,1.21e-13,2;DOID:4159,1.21e-13,2;DOID:0060122,1.21e-13,2
|ontology_enrichment_uberon=UBERON:0000166!1.04e-17!21;UBERON:0000165!2.39e-16!28;UBERON:0000930!2.39e-16!28;UBERON:0001444!1.58e-13!48;UBERON:0000078!6.64e-12!18;UBERON:0000161!3.73e-10!35;UBERON:0003102!5.87e-10!95;UBERON:0001044!9.83e-10!6;UBERON:0003293!9.83e-10!6;UBERON:0003294!9.83e-10!6;UBERON:0010047!9.83e-10!6;UBERON:0000167!9.83e-10!6;UBERON:0001723!1.48e-09!3;UBERON:0001033!1.48e-09!3;UBERON:0010056!1.48e-09!3;UBERON:0001004!3.10e-08!72;UBERON:0000997!1.10e-07!1;UBERON:0005056!1.10e-07!1;UBERON:0002372!2.07e-07!1;UBERON:0001961!2.07e-07!1;UBERON:0001744!2.07e-07!1;UBERON:0001735!2.07e-07!1;UBERON:0000964!2.92e-07!4;UBERON:0004348!2.92e-07!4;UBERON:0005427!2.92e-07!4;UBERON:0006834!4.09e-07!1
|ontology_enrichment_uberon_v019=UBERON:0001723;7.70e-34;3!UBERON:0001033;7.70e-34;3!UBERON:0005795;4.61e-26;1!UBERON:0000020;2.12e-10;23!UBERON:0001032;5.40e-10;24!UBERON:0004456;5.40e-10;24!UBERON:0000165;1.17e-08;28!UBERON:0000964;1.59e-07;4!UBERON:0010409;1.59e-07;4!UBERON:0000014;1.92e-07;4
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.10e-34,3;UBERON:0001033,9.10e-34,3;UBERON:0010056,9.10e-34,3;UBERON:0001042,6.94e-11,10;UBERON:0009145,6.94e-11,10;UBERON:0000166,7.93e-11,22;UBERON:0000020,5.40e-10,24;UBERON:0001032,5.40e-10,24;UBERON:0004456,5.40e-10,24;UBERON:0006562,5.54e-10,11;UBERON:0003102,4.31e-09,99;UBERON:0001444,1.54e-08,49;UBERON:0000165,2.27e-08,29;UBERON:0000930,2.27e-08,29;UBERON:0000964,1.49e-07,4;UBERON:0010409,1.49e-07,4;UBERON:0004348,1.49e-07,4;UBERON:0005427,1.49e-07,4;UBERON:0000033,1.62e-07,56;UBERON:0000014,1.80e-07,4;UBERON:0000161,7.37e-07,36;UBERON:0000153,8.00e-07,62;UBERON:0007811,8.00e-07,62
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|short_description=p3@ALOX12B
}}
}}

Latest revision as of 09:45, 18 September 2015

Short description:p3@ALOX12B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_ALOX12B_5end
Coexpression cluster:C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil
Association with transcript: 158bp_to_NM_001139, uc002gjy.1_5end
EntrezGene:ALOX12B
HGNC: 430
UniProt: O75342
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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