FFCP PHASE1:Hg19::chr12:132280681..132280688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6433 | |EntrezGene=6433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10790 | |HGNC=10790 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000537582_5end | |association_with_transcript=18bp_to_ENST00000537582_5end | ||
|cluster_id=chr12:132280681..132280688,+ | |||
|coexpression_cluster_id=C130 | |coexpression_cluster_id=C130 | ||
|description=CAGE_peak_3_at_SFSWAP_5end | |description=CAGE_peak_3_at_SFSWAP_5end | ||
|id=chr12:132280681..132280688,+ | |id=chr12:132280681..132280688,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.17e-28!5;CL:0000236!2.76e-25!14;CL:0000945!7.35e-18!24;CL:0000826!7.35e-18!24;CL:0000039!8.08e-13!7;CL:0000586!8.08e-13!7;CL:0000540!1.35e-09!6;CL:0000031!1.35e-09!6;CL:0000404!1.35e-09!6;CL:0000838!2.00e-07!52;CL:0000047!2.70e-07!8;CL:0000542!2.94e-07!53;CL:0000051!2.94e-07!53 | |ontology_enrichment_celltype=CL:0002322!1.17e-28!5;CL:0000236!2.76e-25!14;CL:0000945!7.35e-18!24;CL:0000826!7.35e-18!24;CL:0000039!8.08e-13!7;CL:0000586!8.08e-13!7;CL:0000540!1.35e-09!6;CL:0000031!1.35e-09!6;CL:0000404!1.35e-09!6;CL:0000838!2.00e-07!52;CL:0000047!2.70e-07!8;CL:0000542!2.94e-07!53;CL:0000051!2.94e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000540;9.01e-60;6!CL:0000404;9.01e-60;6!CL:0002319;4.64e-14;25!CL:0000236;3.76e-13;13!CL:0000945;1.38e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.96e-60,6;CL:0000031,9.96e-60,6;CL:0000404,9.96e-60,6;CL:0000047,4.34e-45,8;CL:0002319,4.74e-14,25;CL:0000236,2.66e-12,14;CL:0000945,1.36e-07,24;CL:0000826,1.36e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000031;9.01e-60;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!4.52e-08!3;UBERON:0004854!4.52e-08!3;UBERON:0009034!4.52e-08!3;UBERON:0002095!4.52e-08!3;UBERON:0004782!4.52e-08!3;UBERON:0003281!4.52e-08!3;UBERON:0009664!4.52e-08!3;UBERON:0002296!4.52e-08!3;UBERON:0005602!4.52e-08!3;UBERON:0001179!4.52e-08!3;UBERON:0006293!4.52e-08!3;UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1;UBERON:0002146!7.57e-07!1;UBERON:0005623!7.57e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!4.52e-08!3;UBERON:0004854!4.52e-08!3;UBERON:0009034!4.52e-08!3;UBERON:0002095!4.52e-08!3;UBERON:0004782!4.52e-08!3;UBERON:0003281!4.52e-08!3;UBERON:0009664!4.52e-08!3;UBERON:0002296!4.52e-08!3;UBERON:0005602!4.52e-08!3;UBERON:0001179!4.52e-08!3;UBERON:0006293!4.52e-08!3;UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1;UBERON:0002146!7.57e-07!1;UBERON:0005623!7.57e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@SFSWAP | |short_description=p3@SFSWAP | ||
}} | }} |
Latest revision as of 09:32, 17 September 2015
Short description: | p3@SFSWAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFSWAP_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 18bp_to_ENST00000537582_5end |
EntrezGene: | SFSWAP |
HGNC: | 10790 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.96e-60 | 6 |
neuroblast | 9.96e-60 | 6 |
electrically signaling cell | 9.96e-60 | 6 |
neuronal stem cell | 4.34e-45 | 8 |
neural cell | 4.74e-14 | 25 |
B cell | 2.66e-12 | 14 |
lymphocyte of B lineage | 1.36e-07 | 24 |
pro-B cell | 1.36e-07 | 24 |