FFCP PHASE1:Hg19::chr14:24732838..24732850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7051 | |EntrezGene=7051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |HGNC=11777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-92bp_to_ENST00000560226_5end | |association_with_transcript=-92bp_to_ENST00000560226_5end | ||
|cluster_id=chr14:24732838..24732850,- | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_8_at_TGM1_5end | |description=CAGE_peak_8_at_TGM1_5end | ||
|id=chr14:24732838..24732850,- | |id=chr14:24732838..24732850,- | ||
|ontology_enrichment_celltype=CL:0000039!1.40e-09!7;CL:0000586!1.40e-09!7;CL:0000575!3.47e-09!2;CL:0002076!5.58e-07!43;CL:0000223!6.12e-07!59 | |ontology_enrichment_celltype=CL:0000039!1.40e-09!7;CL:0000586!1.40e-09!7;CL:0000575!3.47e-09!2;CL:0002076!5.58e-07!43;CL:0000223!6.12e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.78e-17;7!CL:0000586;2.78e-17;7!CL:0000575;2.37e-15;2!CL:0002577;7.42e-11;3!CL:0000083;2.43e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.90e-17,7;CL:0000586,2.90e-17,7;CL:0000575,2.37e-15,2;CL:0002577,7.42e-11,3;CL:0000083,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.16e-29;1!UBERON:0008814;1.66e-15;2!UBERON:0010056;1.66e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;3.16e-29;1!DOID:10165;3.16e-29;1!DOID:1798;3.16e-29;1!DOID:1793;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.20e-29,1;DOID:10165,4.20e-29,1;DOID:1798,4.20e-29,1;DOID:1793,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.62e-13!14;UBERON:0000158!4.62e-13!14;UBERON:0001987!1.17e-09!4;UBERON:0004340!1.17e-09!4;UBERON:0003124!2.83e-09!7;UBERON:0005795!9.52e-08!22;UBERON:0000478!3.34e-07!24;UBERON:0004119!9.77e-07!169;UBERON:0000925!9.77e-07!169;UBERON:0006595!9.77e-07!169 | |ontology_enrichment_uberon=UBERON:0005631!4.62e-13!14;UBERON:0000158!4.62e-13!14;UBERON:0001987!1.17e-09!4;UBERON:0004340!1.17e-09!4;UBERON:0003124!2.83e-09!7;UBERON:0005795!9.52e-08!22;UBERON:0000478!3.34e-07!24;UBERON:0004119!9.77e-07!169;UBERON:0000925!9.77e-07!169;UBERON:0006595!9.77e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;8.57e-11;3!UBERON:0001033;8.57e-11;3!UBERON:0001043;1.09e-10;3!UBERON:0001987;1.82e-08;4!UBERON:0000964;2.43e-08;4!UBERON:0010409;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,8.17e-11,3;UBERON:0001033,8.17e-11,3;UBERON:0010056,8.17e-11,3;UBERON:0001043,9.90e-11,3;UBERON:0009143,9.90e-11,3;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4;UBERON:0000964,2.43e-08,4;UBERON:0010409,2.43e-08,4;UBERON:0004348,2.43e-08,4;UBERON:0005427,2.43e-08,4 | |||
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| ||
|short_description=p8@TGM1 | |short_description=p8@TGM1 | ||
}} | }} |
Latest revision as of 14:15, 19 September 2015
Short description: | p8@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TGM1_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | -92bp_to_ENST00000560226_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.90e-17 | 7 |
germ cell | 2.90e-17 | 7 |
corneal epithelial cell | 2.37e-15 | 2 |
placental epithelial cell | 7.42e-11 | 3 |
epithelial cell of pancreas | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
tongue | 8.17e-11 | 3 |
gustatory system | 8.17e-11 | 3 |
future tongue | 8.17e-11 | 3 |
esophagus | 9.90e-11 | 3 |
esophageal region | 9.90e-11 | 3 |
placenta | 1.82e-08 | 4 |
allantois | 1.82e-08 | 4 |
cornea | 2.43e-08 | 4 |
eye surface | 2.43e-08 | 4 |
optic eminence | 2.43e-08 | 4 |
corneal primordium | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.20e-29 | 1 |
endocrine pancreas cancer | 4.20e-29 | 1 |
pancreatic endocrine carcinoma | 4.20e-29 | 1 |
pancreatic cancer | 2.61e-08 | 4 |