FFCP PHASE1:Hg19::chr18:3742467..3742480,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3742467..3742480,-
|short_description=p19@DLGAP1
|description=CAGE_peak_19_at_DLGAP1_5end
|association_with_transcript=34bp_to_ENST00000485480_5end
|Entr...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9229 | |EntrezGene=9229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2905 | |HGNC=2905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000485480_5end | |||
|cluster_id=chr18:3742467..3742480,- | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_19_at_DLGAP1_5end | |||
|id=chr18:3742467..3742480,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.53e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.79e-07;82 | |||
|ontology_enrichment_disease=DOID:171!3.67e-16!10;DOID:3095!5.57e-07!22;DOID:2994!5.57e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;2.70e-36;10!DOID:3095;4.85e-17;22!DOID:2994;4.85e-17;22!DOID:169;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.40e-36,10;DOID:3095,4.60e-17,22;DOID:2994,4.60e-17,22;DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.20e-35!22;UBERON:0001869!3.98e-35!32;UBERON:0001950!1.60e-33!20;UBERON:0001893!6.92e-33!34;UBERON:0002020!8.01e-33!34;UBERON:0003528!8.01e-33!34;UBERON:0001049!1.40e-31!57;UBERON:0005068!1.40e-31!57;UBERON:0006241!1.40e-31!57;UBERON:0007135!1.40e-31!57;UBERON:0000956!6.28e-31!25;UBERON:0000203!6.28e-31!25;UBERON:0002616!2.37e-30!59;UBERON:0000955!2.88e-30!69;UBERON:0006238!2.88e-30!69;UBERON:0002780!3.65e-30!41;UBERON:0001890!3.65e-30!41;UBERON:0006240!3.65e-30!41;UBERON:0002791!5.85e-30!33;UBERON:0003080!2.31e-29!42;UBERON:0000073!3.63e-27!94;UBERON:0001016!3.63e-27!94;UBERON:0001017!4.50e-27!82;UBERON:0002346!8.47e-27!90;UBERON:0007023!1.14e-25!115;UBERON:0005743!1.43e-25!86;UBERON:0003075!2.68e-19!86;UBERON:0007284!2.68e-19!86;UBERON:0003056!4.76e-19!61;UBERON:0000924!8.43e-19!173;UBERON:0006601!8.43e-19!173;UBERON:0000033!7.53e-18!123;UBERON:0000153!9.39e-17!129;UBERON:0007811!9.39e-17!129;UBERON:0001871!2.55e-14!7;UBERON:0006947!2.75e-14!3;UBERON:0004054!2.75e-14!3;UBERON:0004121!8.11e-14!169;UBERON:0000200!2.58e-12!6;UBERON:0005904!7.84e-11!4;UBERON:0002021!7.45e-09!5;UBERON:0000349!1.14e-08!5;UBERON:0001872!1.36e-08!5;UBERON:0002680!1.08e-07!9;UBERON:0001895!1.08e-07!9;UBERON:0010092!1.08e-07!9;UBERON:0002771!3.40e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.71e-40;4!UBERON:0000923;2.71e-40;4!UBERON:0010316;2.71e-40;4!UBERON:0005291;2.71e-40;4!UBERON:0002050;1.70e-32;5!UBERON:0005423;1.70e-32;5!UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5!UBERON:0001872;3.22e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0001950;1.53e-08;20!UBERON:0002619;6.98e-08;22!UBERON:0000956;4.41e-07;25!UBERON:0000203;4.41e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5;UBERON:0002021,3.22e-09,5;UBERON:0001872,3.49e-09,5;UBERON:0001950,1.59e-08,20;UBERON:0002346,6.20e-08,86;UBERON:0002619,7.23e-08,22;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0.789168805698781,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81883984866817,0,2.20652288940233,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.128458450192919,1.41696576325585,0.319267718114302,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.03343398250592,0.126831620387814,0,0.548257766857182,0,1.58284119923659,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0.789168805698781,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81883984866817,0,2.20652288940233,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.128458450192919,1.41696576325585,0.319267718114302,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,1.03343398250592,0.126831620387814,0,0.548257766857182,0,1.58284119923659,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p19@DLGAP1 | |||
}} | }} |
Latest revision as of 11:58, 19 September 2015
Short description: | p19@DLGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DLGAP1_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 34bp_to_ENST00000485480_5end |
EntrezGene: | DLGAP1 |
HGNC: | 2905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.53e-09 | 5 |
autonomic nervous system | 2.53e-09 | 5 |
occipital lobe | 3.22e-09 | 5 |
parietal lobe | 3.49e-09 | 5 |
neocortex | 1.59e-08 | 20 |
neurectoderm | 6.20e-08 | 86 |
regional part of cerebral cortex | 7.23e-08 | 22 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.40e-36 | 10 |
germ cell and embryonal cancer | 4.60e-17 | 22 |
germ cell cancer | 4.60e-17 | 22 |
neuroendocrine tumor | 5.54e-08 | 6 |