FFCP PHASE1:Hg19::chr18:3880051..3880088,-: Difference between revisions
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|id=chr18:3880051..3880088,-
|short_description=p13@DLGAP1
|description=CAGE_peak_13_at_DLGAP1_5end
|association_with_transcript=0bp_to_ENST00000498188_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9229 | |EntrezGene=9229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2905 | |HGNC=2905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498188_5end | |||
|cluster_id=chr18:3880051..3880088,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_DLGAP1_5end | |||
|id=chr18:3880051..3880088,- | |||
|ontology_enrichment_celltype=CL:0000047!5.95e-12!8;CL:0000540!1.49e-10!6;CL:0000031!1.49e-10!6;CL:0000404!1.49e-10!6;CL:0002322!5.31e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.56e-48!34;UBERON:0003528!8.56e-48!34;UBERON:0002619!9.57e-45!22;UBERON:0001869!6.93e-42!32;UBERON:0002791!1.67e-40!33;UBERON:0001893!3.36e-39!34;UBERON:0000956!4.33e-39!25;UBERON:0000203!4.33e-39!25;UBERON:0001017!7.10e-39!82;UBERON:0001049!4.48e-38!57;UBERON:0005068!4.48e-38!57;UBERON:0006241!4.48e-38!57;UBERON:0007135!4.48e-38!57;UBERON:0001950!6.77e-38!20;UBERON:0005743!9.46e-37!86;UBERON:0002780!3.75e-35!41;UBERON:0001890!3.75e-35!41;UBERON:0006240!3.75e-35!41;UBERON:0003080!3.27e-34!42;UBERON:0002616!1.29e-33!59;UBERON:0000073!1.30e-32!94;UBERON:0001016!1.30e-32!94;UBERON:0000955!6.84e-30!69;UBERON:0006238!6.84e-30!69;UBERON:0003075!3.29e-23!86;UBERON:0007284!3.29e-23!86;UBERON:0003056!4.17e-22!61;UBERON:0002346!6.62e-22!90;UBERON:0007023!6.79e-21!115;UBERON:0001871!2.79e-17!7;UBERON:0000033!3.85e-17!123;UBERON:0004121!2.57e-16!169;UBERON:0000153!4.79e-16!129;UBERON:0007811!4.79e-16!129;UBERON:0000924!9.08e-16!173;UBERON:0006601!9.08e-16!173;UBERON:0000349!1.12e-12!5;UBERON:0002771!1.49e-12!3;UBERON:0001872!1.88e-12!5;UBERON:0000200!1.53e-10!6;UBERON:0002308!2.91e-10!9;UBERON:0000125!2.91e-10!9;UBERON:0001954!3.71e-09!2;UBERON:0003022!3.71e-09!2;UBERON:0002421!3.71e-09!2;UBERON:0002600!3.71e-09!2;UBERON:0000369!4.73e-09!4;UBERON:0002435!4.73e-09!4;UBERON:0000204!4.73e-09!4;UBERON:0010082!4.73e-09!4;UBERON:0002148!1.77e-08!2;UBERON:0009662!1.77e-08!2;UBERON:0000025!9.40e-08!194;UBERON:0002021!1.10e-07!5;UBERON:0002420!6.52e-07!9;UBERON:0007245!6.52e-07!9;UBERON:0010009!6.52e-07!9;UBERON:0010011!6.52e-07!9;UBERON:0000454!6.52e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;2.21e-15;2!UBERON:0003022;2.21e-15;2!UBERON:0002421;2.21e-15;2!UBERON:0002600;2.21e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0002021;6.21e-07;5!UBERON:0000349;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-15,2;UBERON:0003022,1.78e-15,2;UBERON:0002421,1.78e-15,2;UBERON:0002600,1.78e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0000349,5.70e-07,5;UBERON:0002021,6.04e-07,5 | |||
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| ||
|short_description=p13@DLGAP1 | |||
}} | }} |
Latest revision as of 12:34, 19 September 2015
Short description: | p13@DLGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DLGAP1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000498188_5end |
EntrezGene: | DLGAP1 |
HGNC: | 2905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.78e-15 | 2 |
lobe parts of cerebral cortex | 1.78e-15 | 2 |
hippocampal formation | 1.78e-15 | 2 |
limbic lobe | 1.78e-15 | 2 |
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
limbic system | 5.70e-07 | 5 |
occipital lobe | 6.04e-07 | 5 |