FFCP PHASE1:Hg19::chr18:61442747..61442758,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:61442747..61442758,+
|short_description=p6@SERPINB7
|description=CAGE_peak_6_at_SERPINB7_5end
|association_with_transcript=92bp_to_ENST00000540675_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8710 | |EntrezGene=8710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13902 | |HGNC=13902 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZC0 | |UniProt=F5GZC0 | ||
|association_with_transcript=92bp_to_ENST00000540675_5end | |||
|cluster_id=chr18:61442747..61442758,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_6_at_SERPINB7_5end | |||
|id=chr18:61442747..61442758,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-16!180;CL:0000057!2.81e-16!75;CL:0002620!2.16e-15!23;CL:0002334!1.49e-14!12;CL:0000188!7.36e-09!9;CL:0002537!9.95e-09!5;CL:0000144!9.71e-08!625;CL:0000548!3.63e-07!679;CL:0000004!3.63e-07!679;CL:0000255!3.63e-07!679;CL:0002371!3.84e-07!591;CL:0000012!5.42e-07!682;CL:0000680!8.53e-07!57;CL:0000056!8.53e-07!57;CL:0000355!8.53e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.76e-23;23!CL:0002334;7.36e-20;12!CL:0002579;5.77e-13;3!CL:0002580;2.75e-12;3!CL:0002617;6.07e-09;2!CL:0002537;3.44e-08;5!CL:0002559;2.15e-07;5!CL:0000057;3.50e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.55e-23,23;CL:0000057,4.68e-20,76;CL:0002334,1.06e-19,12;CL:0002579,7.21e-13,3;CL:0002580,3.62e-12,3;CL:0002617,4.99e-09,2;CL:0000136,5.60e-09,15;CL:0002537,3.93e-08,5;CL:0002559,1.63e-07,5;CL:0000134,7.06e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.46e-08!5;DOID:450!2.46e-08!5;DOID:66!2.46e-08!5;DOID:423!2.46e-08!5;DOID:0080000!2.46e-08!5;DOID:11722!2.46e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.21e-07;5!DOID:450;1.21e-07;5!DOID:66;1.21e-07;5!DOID:423;1.21e-07;5!DOID:0080000;1.21e-07;5!DOID:11722;1.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.21e-07,5;DOID:450,1.21e-07,5;DOID:66,1.21e-07,5;DOID:423,1.21e-07,5;DOID:0080000,1.21e-07,5;DOID:11722,1.21e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.89e-14!45;UBERON:0002416!2.89e-14!45;UBERON:0002097!4.77e-14!40;UBERON:0003102!5.65e-11!95;UBERON:0003688!2.17e-10!6;UBERON:0002358!2.17e-10!6;UBERON:0003684!2.17e-10!6;UBERON:0001178!2.17e-10!6;UBERON:0000486!2.94e-09!82;UBERON:0004923!5.31e-08!57;UBERON:0000914!1.19e-07!83;UBERON:0002329!1.19e-07!83;UBERON:0003077!1.19e-07!83;UBERON:0003059!1.19e-07!83;UBERON:0007282!1.19e-07!83;UBERON:0009618!1.19e-07!83;UBERON:0007285!1.19e-07!83;UBERON:0004290!2.20e-07!70;UBERON:0004871!2.47e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.02e-17;6!UBERON:0002358;5.02e-17;6!UBERON:0003684;5.02e-17;6!UBERON:0001178;5.02e-17;6!UBERON:0002097;4.58e-14;41!UBERON:0004457;3.04e-11;9!UBERON:0000042;3.04e-11;9!UBERON:0002199;3.17e-11;46!UBERON:0002416;3.17e-11;46!UBERON:0000310;1.30e-09;10!UBERON:0003102;1.55e-09;50!UBERON:0001443;1.04e-08;11!UBERON:0002073;2.15e-07;5!UBERON:0005631;8.26e-07;10!UBERON:0000158;8.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.81e-18,41;UBERON:0002199,2.50e-18,46;UBERON:0002416,2.50e-18,46;UBERON:0003688,6.25e-17,6;UBERON:0002358,6.25e-17,6;UBERON:0003684,6.25e-17,6;UBERON:0001178,6.25e-17,6;UBERON:0000310,1.35e-09,10;UBERON:0001443,1.07e-08,11;UBERON:0004871,2.12e-08,8;UBERON:0004457,2.67e-08,12;UBERON:0000042,2.67e-08,12;UBERON:0003102,1.58e-07,99;UBERON:0002073,1.63e-07,5;UBERON:0005086,1.63e-07,5 | |||
|phase1_expression=5.81370813665781,1.49870366723688,3.24195129420734,3.00219895059391,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822041490506354,0,0.421352420106746,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,2.51145489964407,1.2813443329114,3.39091041855299,0.900273288253207,0.309157587715317,5.41045134095821,4.65292140828975,4.05063197379039,2.92311015483596,0,2.85354685791128,0,9.9402685904652,2.41805035746337,2.88253006927829,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,2.08014873822732,0,1.41849132023278,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,1.60586089917446,0.946214490203608,2.10854546986884,0.300946099727719,0,0,0,0,0.695068915744663,0,0,0,0,0,0,0,0,5.95458738765064,1.2276957863045,1.12264037773229,6.15067916427365,7.16390148693385,1.12597744800525,2.96836132889982,1.07946785661859,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0.200506470303285,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.827019434907183,0.859361958946189,0.435050081742686,0.596586391912706,0.178064071293475,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0.899362287916574,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,1.00387946542836,0.0982490410131212,0,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5183915079499,0.593929361665277,30.1017488057247,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.274792780205587,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,1.20390222730132,0,0,0,0,3.08896443420251,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,0,4.89881040164114,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0,1.14241563650639,0,0,0.107410557042488,0,0,0.800055529326307,1.37358282073117,1.6837474438296,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76158925377761,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,1.00108261702862,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69591032700152,0.462175628631418,4.32626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,1.56984607612859,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,0,0,0,0,0,0,0 | |phase1_expression=5.81370813665781,1.49870366723688,3.24195129420734,3.00219895059391,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822041490506354,0,0.421352420106746,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,2.51145489964407,1.2813443329114,3.39091041855299,0.900273288253207,0.309157587715317,5.41045134095821,4.65292140828975,4.05063197379039,2.92311015483596,0,2.85354685791128,0,9.9402685904652,2.41805035746337,2.88253006927829,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.626909658919938,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,2.08014873822732,0,1.41849132023278,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,1.60586089917446,0.946214490203608,2.10854546986884,0.300946099727719,0,0,0,0,0.695068915744663,0,0,0,0,0,0,0,0,5.95458738765064,1.2276957863045,1.12264037773229,6.15067916427365,7.16390148693385,1.12597744800525,2.96836132889982,1.07946785661859,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0.200506470303285,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.827019434907183,0.859361958946189,0.435050081742686,0.596586391912706,0.178064071293475,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0.899362287916574,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,1.00387946542836,0.0982490410131212,0,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5183915079499,0.593929361665277,30.1017488057247,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.274792780205587,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,1.20390222730132,0,0,0,0,3.08896443420251,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,0,4.89881040164114,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0,1.14241563650639,0,0,0.107410557042488,0,0,0.800055529326307,1.37358282073117,1.6837474438296,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76158925377761,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,1.00108261702862,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69591032700152,0.462175628631418,4.32626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,1.56984607612859,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,0,0,0,0,0,0,0 | ||
|short_description=p6@SERPINB7 | |||
}} | }} |
Latest revision as of 04:24, 20 September 2015
Short description: | p6@SERPINB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINB7_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 92bp_to_ENST00000540675_5end |
EntrezGene: | SERPINB7 |
HGNC: | 13902 |
UniProt: | F5GZC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.55e-23 | 23 |
fibroblast | 4.68e-20 | 76 |
preadipocyte | 1.06e-19 | 12 |
omentum preadipocyte | 7.21e-13 | 3 |
preadipocyte of the breast | 3.62e-12 | 3 |
adipocyte of breast | 4.99e-09 | 2 |
fat cell | 5.60e-09 | 15 |
amnion mesenchymal stem cell | 3.93e-08 | 5 |
hair follicle cell | 1.63e-07 | 5 |
mesenchymal cell | 7.06e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.81e-18 | 41 |
integument | 2.50e-18 | 46 |
integumental system | 2.50e-18 | 46 |
omentum | 6.25e-17 | 6 |
peritoneum | 6.25e-17 | 6 |
abdominal cavity | 6.25e-17 | 6 |
visceral peritoneum | 6.25e-17 | 6 |
breast | 1.35e-09 | 10 |
chest | 1.07e-08 | 11 |
somatic layer of lateral plate mesoderm | 2.12e-08 | 8 |
cavity lining | 2.67e-08 | 12 |
serous membrane | 2.67e-08 | 12 |
surface structure | 1.58e-07 | 99 |
hair follicle | 1.63e-07 | 5 |
hair follicle placode | 1.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.21e-07 | 5 |
myotonic disease | 1.21e-07 | 5 |
muscle tissue disease | 1.21e-07 | 5 |
myopathy | 1.21e-07 | 5 |
muscular disease | 1.21e-07 | 5 |
myotonic dystrophy | 1.21e-07 | 5 |