FFCP PHASE1:Hg19::chr19:43702360..43702371,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5672 | |EntrezGene=5672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9521 | |HGNC=9521 | ||
|TSSclassifier=strong | |||
|UniProt=Q00888 | |UniProt=Q00888 | ||
|association_with_transcript=-129bp_to_M33665_5end | |association_with_transcript=-129bp_to_M33665_5end | ||
|cluster_id=chr19:43702360..43702371,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_8_at_PSG4_5end | |description=CAGE_peak_8_at_PSG4_5end | ||
|id=chr19:43702360..43702371,- | |id=chr19:43702360..43702371,- | ||
|ontology_enrichment_celltype=CL:0002620!2.62e-12!23;CL:0000197!7.66e-08!6;CL:0000098!7.66e-08!6;CL:0002167!7.66e-08!6;CL:0002580!1.64e-07!3;CL:0000057!8.26e-07!75 | |ontology_enrichment_celltype=CL:0002620!2.62e-12!23;CL:0000197!7.66e-08!6;CL:0000098!7.66e-08!6;CL:0002167!7.66e-08!6;CL:0002580!1.64e-07!3;CL:0000057!8.26e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002561;5.69e-21;2!CL:0002563;3.42e-11;4!CL:0002559;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,6.96e-21,2;CL:0002563,3.42e-11,4;CL:0002559,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:17!2.38e-09!5;DOID:450!2.38e-09!5;DOID:66!2.38e-09!5;DOID:423!2.38e-09!5;DOID:0080000!2.38e-09!5;DOID:11722!2.38e-09!5 | |ontology_enrichment_disease=DOID:17!2.38e-09!5;DOID:450!2.38e-09!5;DOID:66!2.38e-09!5;DOID:423!2.38e-09!5;DOID:0080000!2.38e-09!5;DOID:11722!2.38e-09!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!2.36e-08!40;UBERON:0002199!2.95e-07!45;UBERON:0002416!2.95e-07!45;UBERON:0003102!4.88e-07!95 | |ontology_enrichment_uberon=UBERON:0002097!2.36e-08!40;UBERON:0002199!2.95e-07!45;UBERON:0002416!2.95e-07!45;UBERON:0003102!4.88e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;5.69e-21;2!UBERON:0005942;5.69e-21;2!UBERON:0005932;5.69e-21;2!UBERON:0001987;2.53e-11;4!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0002073;3.22e-09;5!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,6.96e-21,2;UBERON:0005942,6.96e-21,2;UBERON:0005932,6.96e-21,2;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0002073,3.49e-09,5;UBERON:0005086,3.49e-09,5;UBERON:0003124,5.08e-07,7 | |||
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|short_description=p8@PSG4 | |short_description=p8@PSG4 | ||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p8@PSG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PSG4_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -129bp_to_M33665_5end |
EntrezGene: | PSG4 |
HGNC: | 9521 |
UniProt: | Q00888 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 6.96e-21 | 2 |
intestinal epithelial cell | 3.42e-11 | 4 |
hair follicle cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 6.96e-21 | 2 |
hair outer root sheath | 6.96e-21 | 2 |
bulb of hair follicle | 6.96e-21 | 2 |
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |
intestinal mucosa | 3.42e-11 | 4 |
wall of intestine | 3.42e-11 | 4 |
gastrointestinal system mucosa | 3.42e-11 | 4 |
gastrointestinal system epithelium | 3.42e-11 | 4 |
intestinal epithelium | 3.42e-11 | 4 |
hair follicle | 3.49e-09 | 5 |
hair follicle placode | 3.49e-09 | 5 |
chorion | 5.08e-07 | 7 |