FFCP PHASE1:Hg19::chr1:152487916..152487926,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54544 | |EntrezGene=54544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29875 | |HGNC=29875 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGL9 | |UniProt=Q9UGL9 | ||
|association_with_transcript=56bp_to_CR457218_5end | |association_with_transcript=56bp_to_CR457218_5end | ||
|cluster_id=chr1:152487916..152487926,+ | |||
|coexpression_cluster_id=C3867 | |coexpression_cluster_id=C3867 | ||
|description=CAGE_peak_2_at_CRCT1_5end | |description=CAGE_peak_2_at_CRCT1_5end | ||
|id=chr1:152487916..152487926,+ | |id=chr1:152487916..152487926,+ | ||
|ontology_enrichment_celltype=CL:0002231!1.00e-16!3;CL:0002076!9.35e-07!43 | |ontology_enrichment_celltype=CL:0002231!1.00e-16!3;CL:0002076!9.35e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002231;2.62e-23;3!CL:0000312;1.83e-14;5!CL:0000240;2.74e-12;6!CL:0000311;2.74e-12;6!CL:0000079;2.74e-12;6!CL:0000237;2.74e-12;6!CL:0000362;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.62e-23,3;CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000362,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.39e-66;1!CL:0000357;2.74e-12;6!CL:0000114;2.74e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!1.74e-16!3;UBERON:0001033!1.74e-16!3;UBERON:0010056!1.74e-16!3;UBERON:0001557!4.10e-15!19;UBERON:0002372!6.82e-13!1;UBERON:0001961!6.82e-13!1;UBERON:0001744!6.82e-13!1;UBERON:0001735!6.82e-13!1;UBERON:0000161!1.05e-11!35;UBERON:0001042!4.78e-11!10;UBERON:0009145!4.78e-11!10;UBERON:0006562!4.29e-10!11;UBERON:0000065!4.44e-10!53;UBERON:0001004!1.89e-09!72;UBERON:0000166!3.84e-09!21;UBERON:0004119!2.88e-08!169;UBERON:0000925!2.88e-08!169;UBERON:0006595!2.88e-08!169;UBERON:0000341!2.58e-07!2;UBERON:0000165!6.68e-07!28;UBERON:0000930!6.68e-07!28 | |ontology_enrichment_uberon=UBERON:0001723!1.74e-16!3;UBERON:0001033!1.74e-16!3;UBERON:0010056!1.74e-16!3;UBERON:0001557!4.10e-15!19;UBERON:0002372!6.82e-13!1;UBERON:0001961!6.82e-13!1;UBERON:0001744!6.82e-13!1;UBERON:0001735!6.82e-13!1;UBERON:0000161!1.05e-11!35;UBERON:0001042!4.78e-11!10;UBERON:0009145!4.78e-11!10;UBERON:0006562!4.29e-10!11;UBERON:0000065!4.44e-10!53;UBERON:0001004!1.89e-09!72;UBERON:0000166!3.84e-09!21;UBERON:0004119!2.88e-08!169;UBERON:0000925!2.88e-08!169;UBERON:0006595!2.88e-08!169;UBERON:0000341!2.58e-07!2;UBERON:0000165!6.68e-07!28;UBERON:0000930!6.68e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;3.27e-23;3!UBERON:0002367;2.32e-07;11!UBERON:0010147;2.32e-07;11!UBERON:0003937;7.48e-07;12!UBERON:0005399;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,3.27e-23,3;UBERON:0009143,3.27e-23,3;UBERON:0002367,2.32e-07,11;UBERON:0010147,2.32e-07,11;UBERON:0009846,2.32e-07,11;UBERON:0003353,2.32e-07,11;UBERON:0004902,2.32e-07,11;UBERON:0003820,2.32e-07,11;UBERON:0009847,2.32e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12 | |||
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|short_description=p2@CRCT1 | |short_description=p2@CRCT1 | ||
}} | }} |
Latest revision as of 03:34, 17 September 2015
Short description: | p2@CRCT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRCT1_5end |
Coexpression cluster: | C3867_Prostate_esophagus_tongue_throat_amniotic_cervix_Gingival |
Association with transcript: | 56bp_to_CR457218_5end |
EntrezGene: | CRCT1 |
HGNC: | 29875 |
UniProt: | Q9UGL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.62e-23 | 3 |
keratinocyte | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
epidermal cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
esophagus | 3.27e-23 | 3 |
esophageal region | 3.27e-23 | 3 |
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |