FFCP PHASE1:Hg19::chr1:20113550..20113568,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255104 | |EntrezGene=255104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27393 | |HGNC=27393 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK309900_5end | |association_with_transcript=0bp_to_AK309900_5end | ||
|cluster_id=chr1:20113550..20113568,- | |||
|coexpression_cluster_id=C2122 | |coexpression_cluster_id=C2122 | ||
|description=CAGE_peak_5_at_TMCO4_5end | |description=CAGE_peak_5_at_TMCO4_5end | ||
|id=chr1:20113550..20113568,- | |id=chr1:20113550..20113568,- | ||
|ontology_enrichment_celltype=CL:0000039!1.21e-07!7;CL:0000586!1.21e-07!7;CL:0002322!1.84e-07!5;CL:0002076!5.77e-07!43 | |ontology_enrichment_celltype=CL:0000039!1.21e-07!7;CL:0000586!1.21e-07!7;CL:0002322!1.84e-07!5;CL:0002076!5.77e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.04e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.91e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000077!1.40e-10!130;UBERON:0005631!3.01e-10!14;UBERON:0000158!3.01e-10!14;UBERON:0004119!3.26e-10!169;UBERON:0000925!3.26e-10!169;UBERON:0006595!3.26e-10!169;UBERON:0000464!5.35e-10!104;UBERON:0004921!5.53e-10!129;UBERON:0004185!5.53e-10!129;UBERON:0001007!1.77e-09!155;UBERON:0001555!1.77e-09!155;UBERON:0007026!1.77e-09!155;UBERON:0003135!1.69e-08!11;UBERON:0000466!1.76e-08!126;UBERON:0002553!1.37e-07!70;UBERON:0006947!9.55e-07!3;UBERON:0004054!9.55e-07!3;UBERON:0003101!9.59e-07!22;UBERON:0000079!9.59e-07!22 | |ontology_enrichment_uberon=UBERON:0000077!1.40e-10!130;UBERON:0005631!3.01e-10!14;UBERON:0000158!3.01e-10!14;UBERON:0004119!3.26e-10!169;UBERON:0000925!3.26e-10!169;UBERON:0006595!3.26e-10!169;UBERON:0000464!5.35e-10!104;UBERON:0004921!5.53e-10!129;UBERON:0004185!5.53e-10!129;UBERON:0001007!1.77e-09!155;UBERON:0001555!1.77e-09!155;UBERON:0007026!1.77e-09!155;UBERON:0003135!1.69e-08!11;UBERON:0000466!1.76e-08!126;UBERON:0002553!1.37e-07!70;UBERON:0006947!9.55e-07!3;UBERON:0004054!9.55e-07!3;UBERON:0003101!9.59e-07!22;UBERON:0000079!9.59e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.09e-16;3!UBERON:0004054;5.09e-16;3!UBERON:0005904;3.94e-12;4!UBERON:0000341;9.20e-11;2!UBERON:0006562;5.56e-10;2!UBERON:0000058;4.34e-08;10!UBERON:0004175;7.82e-08;21!UBERON:0005631;1.13e-07;10!UBERON:0000158;1.13e-07;10!UBERON:0003124;1.86e-07;3!UBERON:0000920;1.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.10e-16,3;UBERON:0004054,5.10e-16,3;UBERON:0005904,3.95e-12,4;UBERON:0000341,9.67e-11,2;UBERON:0004175,9.65e-09,25;UBERON:0005631,2.87e-08,14;UBERON:0000158,2.87e-08,14;UBERON:0000920,2.04e-07,3;UBERON:0003124,6.90e-07,7 | |||
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| ||
|short_description=p5@TMCO4 | |short_description=p5@TMCO4 | ||
}} | }} |
Latest revision as of 16:58, 19 September 2015
Short description: | p5@TMCO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMCO4_5end |
Coexpression cluster: | C2122_placenta_epididymis_thyroid_skin_amniotic_tongue_parotid |
Association with transcript: | 0bp_to_AK309900_5end |
EntrezGene: | TMCO4 |
HGNC: | 27393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.10e-16 | 3 |
internal male genitalia | 5.10e-16 | 3 |
duct of male reproductive system | 3.95e-12 | 4 |
throat | 9.67e-11 | 2 |
internal genitalia | 9.65e-09 | 25 |
extraembryonic membrane | 2.87e-08 | 14 |
membranous layer | 2.87e-08 | 14 |
egg chorion | 2.04e-07 | 3 |
chorion | 6.90e-07 | 7 |