FFCP PHASE1:Hg19::chr20:15966870..15966891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:15966870..15966891,+ | |||
|coexpression_cluster_id=C1862 | |coexpression_cluster_id=C1862 | ||
|description=CAGE_peak_at_chr20:15966870..15966891,+ | |description=CAGE_peak_at_chr20:15966870..15966891,+ | ||
|id=chr20:15966870..15966891,+ | |id=chr20:15966870..15966891,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.10e-34!24;CL:0000826!4.10e-34!24;CL:0000236!3.39e-29!14;CL:0000838!1.71e-19!52;CL:0000542!4.59e-19!53;CL:0000051!4.59e-19!53;CL:0000313!6.23e-07!1 | |ontology_enrichment_celltype=CL:0000945!4.10e-34!24;CL:0000826!4.10e-34!24;CL:0000236!3.39e-29!14;CL:0000838!1.71e-19!52;CL:0000542!4.59e-19!53;CL:0000051!4.59e-19!53;CL:0000313!6.23e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.30e-19;1!CL:0000236;5.16e-13;13!CL:0000159;1.72e-10;2!CL:0000542;9.31e-09;53!CL:0000945;2.54e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.30e-19,1;CL:0000236,4.50e-12,14;CL:0000159,1.72e-10,2;CL:0000838,1.08e-08,52;CL:0000542,1.57e-08,53;CL:0000051,1.57e-08,53;CL:0000945,2.74e-07,24;CL:0000826,2.74e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;9.31e-09;53 | |||
|ontology_enrichment_disease=DOID:299!1.81e-12!25;DOID:4468!4.16e-12!2;DOID:2152!6.23e-07!1 | |ontology_enrichment_disease=DOID:299!1.81e-12!25;DOID:4468!4.16e-12!2;DOID:2152!6.23e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;4.32e-37;2!DOID:2152;1.30e-19;1!DOID:299;5.46e-12;25!DOID:3493;2.07e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.73e-37,2;DOID:2152,1.30e-19,1;DOID:299,5.54e-12,25;DOID:3493,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002106!8.48e-08!3;UBERON:0004854!8.48e-08!3;UBERON:0009034!8.48e-08!3;UBERON:0002095!8.48e-08!3;UBERON:0004782!8.48e-08!3;UBERON:0003281!8.48e-08!3;UBERON:0009664!8.48e-08!3;UBERON:0002296!8.48e-08!3;UBERON:0005602!8.48e-08!3;UBERON:0001179!8.48e-08!3;UBERON:0006293!8.48e-08!3;UBERON:0006562!2.95e-07!11;UBERON:0004177!5.34e-07!7;UBERON:0004911!6.23e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!8.48e-08!3;UBERON:0004854!8.48e-08!3;UBERON:0009034!8.48e-08!3;UBERON:0002095!8.48e-08!3;UBERON:0004782!8.48e-08!3;UBERON:0003281!8.48e-08!3;UBERON:0009664!8.48e-08!3;UBERON:0002296!8.48e-08!3;UBERON:0005602!8.48e-08!3;UBERON:0001179!8.48e-08!3;UBERON:0006293!8.48e-08!3;UBERON:0006562!2.95e-07!11;UBERON:0004177!5.34e-07!7;UBERON:0004911!6.23e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.30e-19;1!UBERON:0004909;1.72e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.30e-19,1;UBERON:0004909,1.72e-10,2 | |||
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|short_description=p@chr20:15966870..15966891,+ | |short_description=p@chr20:15966870..15966891,+ | ||
}} | }} |
Latest revision as of 12:02, 28 July 2015
Short description: | p@chr20:15966870..15966891, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:15966870..15966891, + |
Coexpression cluster: | C1862_mesothelioma_serous_clear_kidney_heart_hepatoma_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.30e-19 | 1 |
B cell | 4.50e-12 | 14 |
seromucus secreting cell | 1.72e-10 | 2 |
lymphoid lineage restricted progenitor cell | 1.08e-08 | 52 |
lymphocyte | 1.57e-08 | 53 |
common lymphoid progenitor | 1.57e-08 | 53 |
lymphocyte of B lineage | 2.74e-07 | 24 |
pro-B cell | 2.74e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.30e-19 | 1 |
epithelium of gonad | 1.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.73e-37 | 2 |
ovary epithelial cancer | 1.30e-19 | 1 |
adenocarcinoma | 5.54e-12 | 25 |
signet ring cell adenocarcinoma | 2.07e-10 | 2 |