FFCP PHASE1:Hg19::chr20:44747398..44747439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44747398..44747439,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr20:44747398..44747439,+ | |description=CAGE_peak_at_chr20:44747398..44747439,+ | ||
|id=chr20:44747398..44747439,+ | |id=chr20:44747398..44747439,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.50e-43!24;CL:0000826!3.50e-43!24;CL:0000236!9.77e-26!14;CL:0002031!5.05e-22!124;CL:0002087!9.13e-22!119;CL:0000738!9.49e-22!140;CL:0000542!1.14e-21!53;CL:0000051!1.14e-21!53;CL:0000838!2.43e-20!52;CL:0002032!8.97e-17!165;CL:0000837!8.97e-17!165;CL:0000037!1.43e-16!172;CL:0000566!1.43e-16!172;CL:0000988!6.12e-16!182;CL:0002057!3.42e-07!42 | |ontology_enrichment_celltype=CL:0000945!3.50e-43!24;CL:0000826!3.50e-43!24;CL:0000236!9.77e-26!14;CL:0002031!5.05e-22!124;CL:0002087!9.13e-22!119;CL:0000738!9.49e-22!140;CL:0000542!1.14e-21!53;CL:0000051!1.14e-21!53;CL:0000838!2.43e-20!52;CL:0002032!8.97e-17!165;CL:0000837!8.97e-17!165;CL:0000037!1.43e-16!172;CL:0000566!1.43e-16!172;CL:0000988!6.12e-16!182;CL:0002057!3.42e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.91e-65;13!CL:0000945;6.76e-50;24!CL:0000542;2.25e-19;53!CL:0002087;8.83e-13;104!CL:0000860;8.64e-09;33!CL:0002057;8.64e-09;33!CL:0000473;3.59e-07;39!CL:0000234;3.59e-07;39!CL:0000738;7.49e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.58e-61,14;CL:0000945,4.68e-50,24;CL:0000826,4.68e-50,24;CL:0000838,5.69e-26,52;CL:0002031,1.03e-25,120;CL:0000542,1.93e-25,53;CL:0000051,1.93e-25,53;CL:0002087,3.66e-24,115;CL:0000738,2.41e-22,136;CL:0002032,2.09e-18,161;CL:0000837,2.09e-18,161;CL:0000037,1.65e-17,168;CL:0000988,1.84e-16,177;CL:0000134,1.62e-07,354;CL:0002320,2.66e-07,361;CL:0000860,3.33e-07,42;CL:0002057,3.33e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;2.25e-19;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.07e-08!10 | |ontology_enrichment_disease=DOID:0060058!3.07e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:630;7.54e-10;1!DOID:0050177;7.54e-10;1!DOID:0060060;7.54e-10;1!DOID:0060061;7.54e-10;1!DOID:0050427;7.54e-10;1!DOID:8691;7.54e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.55e-10,1;DOID:0050177,7.55e-10,1;DOID:0050427,7.55e-10,1;DOID:0060060,8.99e-10,1;DOID:0060061,8.99e-10,1;DOID:8691,8.99e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.66e-09!112;UBERON:0002390!3.79e-09!102;UBERON:0003061!3.79e-09!102;UBERON:0002106!1.19e-07!3;UBERON:0004854!1.19e-07!3;UBERON:0009034!1.19e-07!3;UBERON:0002095!1.19e-07!3;UBERON:0004782!1.19e-07!3;UBERON:0003281!1.19e-07!3;UBERON:0009664!1.19e-07!3;UBERON:0002296!1.19e-07!3;UBERON:0005602!1.19e-07!3;UBERON:0001179!1.19e-07!3;UBERON:0006293!1.19e-07!3;UBERON:0003081!5.79e-07!216 | |ontology_enrichment_uberon=UBERON:0002193!1.66e-09!112;UBERON:0002390!3.79e-09!102;UBERON:0003061!3.79e-09!102;UBERON:0002106!1.19e-07!3;UBERON:0004854!1.19e-07!3;UBERON:0009034!1.19e-07!3;UBERON:0002095!1.19e-07!3;UBERON:0004782!1.19e-07!3;UBERON:0003281!1.19e-07!3;UBERON:0009664!1.19e-07!3;UBERON:0002296!1.19e-07!3;UBERON:0005602!1.19e-07!3;UBERON:0001179!1.19e-07!3;UBERON:0006293!1.19e-07!3;UBERON:0003081!5.79e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.21e-07,371 | |||
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| ||
|short_description=p@chr20:44747398..44747439,+ | |short_description=p@chr20:44747398..44747439,+ | ||
}} | }} |
Latest revision as of 14:40, 28 July 2015
Short description: | p@chr20:44747398..44747439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44747398..44747439, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.58e-61 | 14 |
lymphocyte of B lineage | 4.68e-50 | 24 |
pro-B cell | 4.68e-50 | 24 |
lymphoid lineage restricted progenitor cell | 5.69e-26 | 52 |
hematopoietic lineage restricted progenitor cell | 1.03e-25 | 120 |
lymphocyte | 1.93e-25 | 53 |
common lymphoid progenitor | 1.93e-25 | 53 |
nongranular leukocyte | 3.66e-24 | 115 |
leukocyte | 2.41e-22 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-18 | 161 |
hematopoietic stem cell | 1.65e-17 | 168 |
hematopoietic cell | 1.84e-16 | 177 |
mesenchymal cell | 1.62e-07 | 354 |
connective tissue cell | 2.66e-07 | 361 |
classical monocyte | 3.33e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.21e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.55e-10 | 1 |
monogenic disease | 7.55e-10 | 1 |
xeroderma pigmentosum | 7.55e-10 | 1 |
non-Hodgkin lymphoma | 8.99e-10 | 1 |
cutaneous T cell lymphoma | 8.99e-10 | 1 |
mycosis fungoides | 8.99e-10 | 1 |