FFCP PHASE1:Hg19::chr21:17566590..17566632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388815 | |EntrezGene=388815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000419952,NR_027791,uc002ykc.2_5end | |association_with_transcript=-66bp_to_ENST00000419952,NR_027791,uc002ykc.2_5end | ||
|cluster_id=chr21:17566590..17566632,+ | |||
|coexpression_cluster_id=C4066 | |coexpression_cluster_id=C4066 | ||
|description=CAGE_peak_4_at_LINC00478_5end | |description=CAGE_peak_4_at_LINC00478_5end | ||
|id=chr21:17566590..17566632,+ | |id=chr21:17566590..17566632,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-14!115;UBERON:0000153!7.13e-13!129;UBERON:0007811!7.13e-13!129;UBERON:0000033!7.76e-13!123;UBERON:0002616!1.01e-12!59;UBERON:0005743!1.86e-12!86;UBERON:0000955!1.99e-12!69;UBERON:0006238!1.99e-12!69;UBERON:0001017!2.11e-12!82;UBERON:0001049!3.07e-12!57;UBERON:0005068!3.07e-12!57;UBERON:0006241!3.07e-12!57;UBERON:0007135!3.07e-12!57;UBERON:0003075!5.50e-11!86;UBERON:0007284!5.50e-11!86;UBERON:0002346!4.71e-10!90;UBERON:0000468!4.71e-10!659;UBERON:0000073!4.90e-10!94;UBERON:0001016!4.90e-10!94;UBERON:0000062!5.67e-10!511;UBERON:0000479!1.46e-09!787;UBERON:0003080!2.49e-09!42;UBERON:0000480!2.65e-09!626;UBERON:0000467!2.75e-09!625;UBERON:0002780!7.73e-09!41;UBERON:0001890!7.73e-09!41;UBERON:0006240!7.73e-09!41;UBERON:0000475!1.16e-08!365;UBERON:0004121!1.61e-08!169;UBERON:0000924!5.06e-08!173;UBERON:0006601!5.06e-08!173;UBERON:0000477!1.24e-07!286;UBERON:0003056!1.84e-07!61;UBERON:0002020!1.89e-07!34;UBERON:0003528!1.89e-07!34;UBERON:0002791!3.40e-07!33;UBERON:0001893!4.00e-07!34;UBERON:0000481!4.27e-07!347;UBERON:0002050!8.52e-07!605;UBERON:0005423!8.52e-07!605 | |ontology_enrichment_uberon=UBERON:0007023!2.46e-14!115;UBERON:0000153!7.13e-13!129;UBERON:0007811!7.13e-13!129;UBERON:0000033!7.76e-13!123;UBERON:0002616!1.01e-12!59;UBERON:0005743!1.86e-12!86;UBERON:0000955!1.99e-12!69;UBERON:0006238!1.99e-12!69;UBERON:0001017!2.11e-12!82;UBERON:0001049!3.07e-12!57;UBERON:0005068!3.07e-12!57;UBERON:0006241!3.07e-12!57;UBERON:0007135!3.07e-12!57;UBERON:0003075!5.50e-11!86;UBERON:0007284!5.50e-11!86;UBERON:0002346!4.71e-10!90;UBERON:0000468!4.71e-10!659;UBERON:0000073!4.90e-10!94;UBERON:0001016!4.90e-10!94;UBERON:0000062!5.67e-10!511;UBERON:0000479!1.46e-09!787;UBERON:0003080!2.49e-09!42;UBERON:0000480!2.65e-09!626;UBERON:0000467!2.75e-09!625;UBERON:0002780!7.73e-09!41;UBERON:0001890!7.73e-09!41;UBERON:0006240!7.73e-09!41;UBERON:0000475!1.16e-08!365;UBERON:0004121!1.61e-08!169;UBERON:0000924!5.06e-08!173;UBERON:0006601!5.06e-08!173;UBERON:0000477!1.24e-07!286;UBERON:0003056!1.84e-07!61;UBERON:0002020!1.89e-07!34;UBERON:0003528!1.89e-07!34;UBERON:0002791!3.40e-07!33;UBERON:0001893!4.00e-07!34;UBERON:0000481!4.27e-07!347;UBERON:0002050!8.52e-07!605;UBERON:0005423!8.52e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.61e-08;9!UBERON:0001557;5.61e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.91e-11,114;UBERON:0001737,4.93e-08,9;UBERON:0001017,3.19e-07,81 | |||
|phase1_expression=2.72517568905835,0.428201047781966,2.11431606143957,3.00219895059391,1.34088328328186,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.61560529038394,0.612002073732759,1.25381888591235,5.72471974262113,2.46373965131192,2.13422487311165,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0.587200878669695,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,1.15877215168659,0,0,2.07976597760949,0.443458794925128,1.05401742831751,2.5540919722054,0,0.741568885568859,0.649094787309367,0.522389211897802,1.19662164466979,0.715471872916026,0,2.22874500797739,0.198762407366705,0.860234595106124,0.694281003215189,0,0,0.275118041940067,0.417989933073621,0.775250277507987,0.71153252537342,1.00416183829401,0.402829317109147,0,0,0,0,4.55428614248807,2.91888184414021,1.91439516821648,0,0,0.916008719652036,0,0,0.436094052142534,2.48485975847659,0.25326102332916,1.05927344650575,5.44989579422746,0.709336764396714,0,0,0,0.622422070799533,1.61652806483626,0.326923806226917,2.11900398702904,1.72852777344,0.70296429550139,0,0,0.747243402759005,1.64408298101271,0.647491777472526,0.280901613404497,1.02077085627447,1.84251475967652,0.723280468230358,3.56400857184616,0.741800787835671,0.910161361938026,0,0.841680569770331,2.50237039743928,0.554128230968366,0.877955241761676,0.612975591598039,0.600952235626387,0.113432183160021,1.07633781413317,0.213557388818567,1.05965950579781,1.20036438433761,2.37020817248409,4.3798891807757,0.930584281657949,0.843881661206331,0.389748020644795,4.03894038790583,2.76149695926898,2.7479829659198,1.06502877754984,0.201504196455281,0,0,0.545492241181669,0,0,0,0,0.207322110030741,0,0,1.56449532329816,1.92972281457866,1.38134921352481,1.39310378409594,0,3.19428360107579,3.20310911148393,1.44606617930089,3.08823123650703,1.96091499683166,2.37270619111097,3.50561401216427,3.13954344200554,2.30848294167834,2.21446636387394,0,0.8231480226628,1.47008711385542,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0.977424915930974,0,0,0.115930404975077,0.587043471179108,0,0,0.190254152234598,0,0,2.21595305478658,0,1.18904929830983,0,1.84780341018745,1.13420077793909,0,0,0,3.4486426652716,1.84901711427775,8.29312462163088,7.63835753109896,5.80715193761348,0,0,0,0,0,0,0.285826432630578,2.13049060256185,1.74384027533312,0.66004457238855,0.904902010304444,0,0,0.797814349754612,0,0.771622122786426,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.499864955910285,0,0,2.10833939483032,0.718874566474748,1.14861935834114,0,0,0.61642896765115,0.358121926479791,0,0,0,0.128343036279748,2.28685161800217,0,1.54657762555539,0.167516265334349,0,0,0,0,0.613457458595699,0,0.271265023699736,0.623912584592421,0.178428988797162,0,1.28855556491985,1.20378439891088,0,1.03473071292505,0.664225598535437,0.368738337083406,5.29990048255305,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0.496215615637554,3.06923946576125,0.561320188866147,1.15325234330131,2.55853624533352,0.804269605718038,1.48418066444991,0.462629081407967,0.177561725313127,0.821271560138091,1.03850885836724,0,0,0.40101294060657,0.552485933615378,1.37777337797528,2.91345868810747,3.01586154406675,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.510281115829547,1.29549549661284,3.08454505380579,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.618246069886334,0.732555718546747,1.07262349896764,0,0,0,1.06337790121334,1.54048617114644,1.5350367472613,2.20538515975249,11.7088066906418,4.35050081742686,3.32383846922794,0.712256285173899,0.661139661443912,1.15314040419064,3.82838137483752,0.10115778085555,0.464845549297286,3.46293581513704,0,0,0,0,0,0.572499546967965,1.48863347743867,2.53103539774981,2.2875623270859,1.27948895655667,2.1396949401696,0,0,3.41757669408298,4.66712950551293,3.41655966802491,0,0,0,1.46290121726877,0.974853958525138,1.05650146756755,1.09199929126389,2.2624869112594,0,0,0,0,1.73632660280006,0.655894752046633,0,0,0,0.286822704408103,0.88424136911809,0,1.41904425628239,1.68886108238131,0.987884678879706,0,2.44954304171488,0.384888450902048,0,0,0.941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0.371606350251437,1.87549976869378,0.213425530045242,0,2.59453182862662,0,2.54008299268659,0.973865820823666,1.12318871245384,0.228234679033192,0.156679895773023,0,0.846458889008016,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,6.15436994738562,1.6227340708559,0,0,0,1.0255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| ||
|short_description=p4@LINC00478 | |short_description=p4@LINC00478 | ||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p4@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LINC00478_5end |
Coexpression cluster: | C4066_uterus_cervix_seminal_medulloblastoma_Skeletal_ductus_epitheloid |
Association with transcript: | -66bp_to_ENST00000419952, NR_027791, uc002ykc.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.91e-11 | 114 |
larynx | 4.93e-08 | 9 |
central nervous system | 3.19e-07 | 81 |