FFCP PHASE1:Hg19::chr3:8793578..8793596,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:8793578..8793596,- | |||
|coexpression_cluster_id=C2758 | |coexpression_cluster_id=C2758 | ||
|description=CAGE_peak_at_chr3:8793578..8793596,- | |description=CAGE_peak_at_chr3:8793578..8793596,- | ||
|id=chr3:8793578..8793596,- | |id=chr3:8793578..8793596,- | ||
|ontology_enrichment_celltype=CL:0002620!7.71e-11!23;CL:0002579!9.48e-10!3;CL:0002580!1.27e-09!3;CL:0000057!1.81e-09!75;CL:0000197!4.18e-09!6;CL:0000098!4.18e-09!6;CL:0002167!4.18e-09!6;CL:0002334!1.84e-08!12;CL:0002617!6.38e-07!2 | |ontology_enrichment_celltype=CL:0002620!7.71e-11!23;CL:0002579!9.48e-10!3;CL:0002580!1.27e-09!3;CL:0000057!1.81e-09!75;CL:0000197!4.18e-09!6;CL:0000098!4.18e-09!6;CL:0002167!4.18e-09!6;CL:0002334!1.84e-08!12;CL:0002617!6.38e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000197;2.25e-48;6!CL:0000098;2.25e-48;6!CL:0002167;2.25e-48;6!CL:0000710;7.42e-15;20!CL:0000075;4.25e-11;27!CL:0000077;3.24e-09;19!CL:0002077;4.95e-08;34!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.25e-48,6;CL:0000098,3.25e-48,6;CL:0002167,3.25e-48,6;CL:0000710,8.27e-15,20;CL:0000075,4.60e-11,27;CL:0000077,3.06e-09,19;CL:0002077,7.54e-09,34;CL:0000133,1.71e-07,59;CL:0000346,2.19e-07,3;CL:1000428,2.19e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3350!9.92e-07!2 | |ontology_enrichment_disease=DOID:3350!9.92e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:2513;2.97e-19;1!DOID:4235;2.97e-19;1!DOID:3451;2.60e-10;2!DOID:4159;2.60e-10;2!DOID:0060122;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.88e-19,1;DOID:4235,3.91e-19,1;DOID:3451,2.07e-10,2;DOID:4159,2.07e-10,2;DOID:0060122,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.74e-12!6;UBERON:0002358!1.74e-12!6;UBERON:0003684!1.74e-12!6;UBERON:0001178!1.74e-12!6;UBERON:0002097!3.67e-08!40;UBERON:0000310!3.02e-07!10;UBERON:0002199!5.68e-07!45;UBERON:0002416!5.68e-07!45 | |ontology_enrichment_uberon=UBERON:0003688!1.74e-12!6;UBERON:0002358!1.74e-12!6;UBERON:0003684!1.74e-12!6;UBERON:0001178!1.74e-12!6;UBERON:0002097!3.67e-08!40;UBERON:0000310!3.02e-07!10;UBERON:0002199!5.68e-07!45;UBERON:0002416!5.68e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.19e-07,3;UBERON:0001992,2.19e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0.206105058476878,1.03056216018252,0.744467425326359,0.506328996723799,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,1.24782516918484,2.85486382075459,1.10391690523754,2.57711112983969,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0.965123526861645,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,1.86623752597084,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.453411851024545,1.389134845943,0,3.04451029838529,0,0.657852148736121,1.41351316756705,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0.206105058476878,1.03056216018252,0.744467425326359,0.506328996723799,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,1.24782516918484,2.85486382075459,1.10391690523754,2.57711112983969,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0.965123526861645,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,1.86623752597084,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.453411851024545,1.389134845943,0,3.04451029838529,0,0.657852148736121,1.41351316756705,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr3:8793578..8793596,- | |short_description=p@chr3:8793578..8793596,- | ||
}} | }} |
Latest revision as of 23:49, 29 July 2015
Short description: | p@chr3:8793578..8793596, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:8793578..8793596, - |
Coexpression cluster: | C2758_Olfactory_mesothelioma_Fibroblast_Preadipocyte_basal_Hair_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.25e-48 | 6 |
sensory epithelial cell | 3.25e-48 | 6 |
olfactory epithelial cell | 3.25e-48 | 6 |
neurecto-epithelial cell | 8.27e-15 | 20 |
columnar/cuboidal epithelial cell | 4.60e-11 | 27 |
mesothelial cell | 3.06e-09 | 19 |
ecto-epithelial cell | 7.54e-09 | 34 |
neurectodermal cell | 1.71e-07 | 59 |
hair follicle dermal papilla cell | 2.19e-07 | 3 |
stem cell of epidermis | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.19e-07 | 3 |
papillary layer of dermis | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.88e-19 | 1 |
spindle cell sarcoma | 3.91e-19 | 1 |
skin carcinoma | 2.07e-10 | 2 |
skin cancer | 2.07e-10 | 2 |
integumentary system cancer | 2.07e-10 | 2 |